Tnf Antibody

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Description

Overview of TNF Antibodies

TNF antibodies are laboratory-engineered proteins that bind to TNF, blocking its ability to activate TNF receptors (TNFR1 and TNFR2) on target cells . By inhibiting TNF signaling, these antibodies mitigate excessive inflammation, a hallmark of conditions like rheumatoid arthritis (RA), psoriasis, and inflammatory bowel disease (IBD) . TNF exists in both soluble (sTNF) and transmembrane (tmTNF) forms, with antibodies typically targeting the soluble form to prevent receptor activation .

Mechanism of Action

TNF antibodies function through two primary mechanisms:

  • Neutralization of soluble TNF: Antibodies bind to circulating TNF, preventing it from interacting with TNFR1 and TNFR2 .

  • Modulation of transmembrane TNF signaling: Some antibodies also bind to tmTNF, potentially inducing reverse signaling in immune cells to suppress inflammatory pathways .

For example, the monoclonal antibody MAB610 (R&D Systems) neutralizes human TNF-α with a median neutralization dose (ND₅₀) of 0.01–0.04 µg/mL in vitro, as demonstrated in L-929 fibroblast cytotoxicity assays .

Therapeutic Applications

TNF antibodies are FDA-approved for multiple autoimmune diseases :

ConditionExamples of TNF AntibodiesKey Effects
Rheumatoid arthritisInfliximab, AdalimumabReduces joint inflammation and erosion
PsoriasisEtanercept, CertolizumabDecreases skin plaque formation
Inflammatory bowel diseaseGolimumab, VedolizumabAlleviates intestinal inflammation

Clinical improvements are typically observed within 2–4 weeks, with maximal effects after 3–6 months .

Research Findings and Innovations

Recent studies highlight advancements in TNF antibody development and application:

Detection and Neutralization Efficacy

The antibody MAB610 demonstrates high specificity for human TNF-α in Western blot and ELISA assays, detecting TNF-α at concentrations as low as 25 ng/mL .

Assay TypeTargetDetection LimitND₅₀
Western blotRecombinant TNF25 ngN/A
L-929 cytotoxicityBioactive TNF0.25 ng/mL0.01–0.04 µg/mL

In Vivo Models

In collagen-induced arthritis (CIA) models, TNF antibodies reduce bone erosion and osteophyte formation. For instance, treatment with SAR441566 (a small-molecule TNF inhibitor) at 10 mg/kg BID showed efficacy comparable to anti-TNF biologics, preserving bone volume/tissue volume (BV/TV) by 25–30% .

Challenges and Future Directions

While TNF antibodies are transformative in autoimmune therapy, challenges include:

  • Immunogenicity: Some patients develop anti-drug antibodies, reducing efficacy over time .

  • Infection risk: TNF blockade may increase susceptibility to infections like tuberculosis .
    Ongoing research focuses on engineering next-generation antibodies with improved specificity and reduced side effects .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (12-14 weeks)
Synonyms
Tnf antibody; Tnfa antibody; Tnfsf2 antibody; Tumor necrosis factor antibody; Cachectin antibody; TNF-alpha antibody; Tumor necrosis factor ligand superfamily member 2 antibody; TNF-a) [Cleaved into: Tumor necrosis factor antibody; membrane form antibody; N-terminal fragment antibody; NTF); Intracellular domain 1 antibody; ICD1); Intracellular domain 2 antibody; ICD2); C-domain 1; C-domain 2; Tumor necrosis factor antibody; soluble form] antibody
Target Names
Tnf
Uniprot No.

Target Background

Function
Tumor Necrosis Factor (TNF), also known as TNF-alpha, is a cytokine that binds to TNFRSF1A/TNFR1 and TNFRSF1B/TNFBR. Primarily secreted by macrophages, TNF exhibits a range of biological activities, including the induction of cell death in specific tumor cell lines. It is a potent pyrogen, causing fever directly or indirectly through stimulation of interleukin-1 secretion. TNF is implicated in the induction of cachexia, a wasting syndrome characterized by weight loss and muscle atrophy. However, under certain conditions, it can also stimulate cell proliferation and induce cell differentiation. TNF induces insulin resistance in adipocytes by inhibiting insulin-induced IRS1 tyrosine phosphorylation and insulin-induced glucose uptake. It also induces GKAP42 protein degradation in adipocytes, which contributes to TNF-induced insulin resistance. TNF plays a role in angiogenesis, inducing VEGF production synergistically with IL1B and IL6. The TNF intracellular domain (ICD) form induces IL12 production in dendritic cells.
Gene References Into Functions
  1. During autosomal dominant retinitis pigmentosa progression, unfolded protein response activation leads to TNFalpha secretion by cones, triggering a self-destructive program that culminates in their cell death. PMID: 27750040
  2. In a hypercaloric environment, persistent elevation of microglial reactivity and consequent TNFalpha secretion induces mitochondrial stress in POMC neurons, contributing to the development of obesity. Specific disruption of the gene expressions of TNFalpha downstream signals TNFSF11A or NDUFAB1 in the mediobasal hypothalamus of diet-induced obese mice reverses mitochondrial elongation and reduces obesity. PMID: 28489068
  3. Persistent stimulation with titanium particles may lead to a consistent release of TNF-alpha and IL-6 via SPHK-2 activity, which may contribute to aseptic implant loosening. PMID: 29728804
  4. Exercise-induced improvements in recognition memory were observed in WT mice. These improvements were impaired in TNFR1(-/-) exercise mice, showing non-significant impairment. Exercise resulted in non-significant but meaningful impairments in spatial learning in TNFR1(-/-) exercise mice, with modest improvement in TNF(-/-) exercise mice. PMID: 29969604
  5. In vitro, mild uncoupling rescued endothelial permeability, disassembly of cell contacts, and VE-cadherin cleavage by matrix metalloprotease 9 (MMP9) induced by TNF. The uncouplers prevented TNF-induced expression of MMP9 via inhibition of NFkappaB signaling. PMID: 28131916
  6. Macrophage-TNF-induced AKT/beta-catenin signaling in Lgr5(+) hair follicle stem cells plays a crucial role in promoting hair follicle cycling and neogenesis after wounding. PMID: 28345588
  7. Transmembrane TNF, TNFR2, and TNFR1 (indirectly) are critical for preventing inflammation during BCG-induced pleurisy in mice. PMID: 29973541
  8. Research findings indicate a novel role for TNFalpha as a key regulator of neutrophil trafficking into and within the lymphatic system in vivo. PMID: 28287124
  9. Our research suggests that TNF-alpha and TNF-R1 are the major contributors to the TNF signaling pathway in anesthesia-induced spinal cord neurotoxicity. Targeting TNF-alpha / TNF-R1, rather than the TNF-R2 signaling pathway, may be crucial for rescuing or preventing anesthesia-induced apoptotic injury in spinal cord neurons. PMID: 29802833
  10. Observations from this research reveal that Quercetin suppressed the production of proinflammatory cytokines at different levels, such as TNF-alpha and IL-1beta, and inhibits the activation of I-kappaB phosphorylation, while the total content was not affected. PMID: 29322353
  11. This is the first evidence to suggest that TET2 mutations promote clonal dominance with aging by conferring TNFalpha resistance to sensitive bone marrow progenitors while also propagating an inflammatory environment. PMID: 29195897
  12. Elevated A20 promotes TNF-induced and RIPK1-dependent intestinal epithelial cell death. PMID: 30209212
  13. M. tuberculosis and TNFalpha synergize to induce necroptosis in murine fibroblasts via RIPK1-dependent mechanisms, characterized by phosphorylation of Ser345 of the MLKL necroptosis death effector. PMID: 28892415
  14. Our current study demonstrated that in allergic airway disease (AAD) mice, intestinal dysbiosis (ID) caused increased nasal rubbing, sneezing, serum OVA specific IgE level, and pro-inflammatory cytokine TNF-alpha in NALF and BALF. ID also inhibited miR-130a expression in AAD mice. Further molecular experiments indicated that miR-130a could specifically target and repress TNF-alpha mRNA expression. PMID: 29702281
  15. These data may indicate that insulin resistance in Adp(-/-) mice is likely caused by an increase in concentrations of TNFalpha and FFA via downregulation of PPARalpha. PMID: 29445073
  16. TNF-alpha is involved in cardiac PHLPP1 upregulation during reoxygenation, which is mediated by NF-kappaB transcriptional activity. PMID: 29940243
  17. Lack of TNF-alpha signaling through Tnfr1 makes the mice more susceptible to acute infection but does not alter the state of latency and reactivation of HSV-1. PMID: 29113822
  18. Although TNFalpha does not induce osteoclastogenesis alone, it does work with RANKL to induce osteoclastic differentiation, and the NFkappaB pathway may play an important role in this process. PMID: 29512766
  19. Two different modes of necroptosis induction by TNFalpha exist which are differentially regulated by iuRIPK1 formation. This work reveals a distinct mechanism of RIPK1 activation that mediates the signaling mechanism of RDA as well as a type of necroptosis. PMID: 29891719
  20. Results demonstrate a critical role for the TRPM2 channel in Abeta42-induced microglial activation and generation of TNF-alpha: PKC/NOX-mediated generation of ROS and activation of PARP-1 are required for Abeta42-induced TRPM2 channel activation. Furthermore, the PYK2/MEK/ERK signaling pathway as a positive feedback mechanism downstream of TRPM2 channel activation facilitates further activation of PARP-1 and TRPM2... PMID: 29143372
  21. TNFalpha may act reciprocally with DRA, leading to the development of intestinal inflammation. PMID: 29286110
  22. TNF-alpha plays a pivotal role in the development of nonalcoholic fatty liver disease and progression to nonalcoholic steatohepatitis. PMID: 28922680
  23. Cross-fostering and conditional knockout experiments indicated that a TNF-alpha deficit in the maternal brain, rather than in the hematopoietic system, and during gestation was responsible for the low-fear offspring phenotype. PMID: 29199072
  24. In a retinitis pigmentosa mouse model, TrkC activity generates phosphorylated Erk, which upregulates glial TNF-alpha, causing selective neuronal death. PMID: 29242588
  25. Genome-wide knockdown of 19 ribosomal proteins resulted in decreased IL-10 and increased TNF-alpha production. PMID: 29657255
  26. We conclude that one of the possible regulatory mechanisms of TNF in mechanical orofacial hyperalgesia involves upregulation of the nociceptor TRPV1. PMID: 29132095
  27. The work highlighted the modulatory role of miR-105 in TNF-alpha-induced epithelial-mesenchymal transition and promoting colorectal cancer metastasis. PMID: 29238068
  28. These results suggest that glucocorticoids' effects on adipose tissue immune response, both in a pro- and an anti-inflammatory manner, depend on the nutritional status. PMID: 29847081
  29. This study demonstrated that TNF-alpha genetic deletion ameliorates the amyloid phenotype of the 5XFAD mouse model of AD. 5XFAD/TNF-alpha-/- mice exhibit significantly decreased amyloid deposition and reduced levels of AbetaPP-CTFs and amyloid-beta protein. PMID: 28826177
  30. Data suggest that expression of Tnfa in adipocytes can be regulated by dietary fatty acids; here, polyunsaturated fatty acids regulate Tnfa expression via alteration in methylation of Tnfa promoter in rats fed polyunsaturated fatty acids (safflower oil versus coconut/olive oil) and in mouse adipocyte cell line incubated with polyunsaturated fatty acid (linoleic acid versus palmitic/oleic acids). PMID: 28575756
  31. A precise mechanism for attenuation of HgCl2-induced liver dysfunction by dietary luteolin via regulating Sirt1/Nrf2/TNF-alpha signaling pathway is elucidated, providing a foundation for further study of luteolin as a novel therapeutic agent against inorganic mercury poisoning. PMID: 27853236
  32. A significant increase in plasma levels of IL-2, IFN-g, and TNF-a was revealed as assessed by ELISA. In conclusion, the results of the present study indicate that MENK has a cytotoxic effect on B16 melanoma cells in vitro and in vivo, suggesting a potential mechanism for these bioactivities. PMID: 28849104
  33. Findings suggest that PGRN deficiency leads to excessive NF-kappaB activation in microglia and elevated TNFalpha signaling, which in turn lead to hyperexcitability of medium spiny neurons and obsessive-compulsive behavior-like behavior. PMID: 28438992
  34. Findings highlight an epigenetic mechanism by which EZH2 integrates the multifaceted effects of TNFalpha signaling to promote the inflammatory response and apoptosis in colitis. PMID: 28439030
  35. It is possible that JNK and TNF-alpha commonly contribute to kidney damage by assembling a positive feedback cycle after crush syndrome, leading to increased apoptosis in the renal cortex. HMGB1 from the muscle may be the trigger. PMID: 28701229
  36. Cytokine-inducing and anti-inflammatory activity of chitosan and its low-molecular derivative. PMID: 29513410
  37. Excessive death of hepatocytes is a characteristic of liver injury. A new programmed cell death pathway has been described involving upstream death ligands such as TNF and downstream kinases such as RIPK1. PMID: 28088582
  38. Taken together, we have demonstrated a role for TNF in the development of classically activated macrophages in listeriosis. PMID: 28545808
  39. Inhibition of signaling stimulated by both TNF and IL1beta synergizes with NF-kappaB inhibition in eliminating leukemic stem cells. PMID: 28039479
  40. Calyptranthes grandifolia O.Berg (Myrtaceae) ethanolic extract inhibits TNF-alpha gene expression and cytokine release in vitro. PMID: 28447740
  41. Results show that interleukin 6 (IL6) promotes oval cell proliferation and liver regeneration, while tumor necrosis factor alpha (TNFalpha) and TNF receptor-1(TNFR1) do not affect this process. PMID: 27556180
  42. This study adds to the evidence that both peripheral and brain region-specific increases in tumor necrosis factor alpha lead to both sickness and depression- and anxiety disorder-relevant behavior, and do so via different pathways. PMID: 27515532
  43. Lactosylceramide-Induced Phosphorylation Signaling to Group IVA Phospholipase A2 via Reactive Oxygen Species in Tumor Necrosis Factor-alpha-Treated Cells. PMID: 28444900
  44. The current study demonstrated that honey can stimulate or suppress the mRNA expression of some pro-inflammatory cytokines in mice brains. Furthermore, honey suppresses the TNF-alpha mRNA expression in the presence of T. gondii infection but stimulates the IL-1beta and IL-6 mRNA expression. Treatment of the mice with honey reduces parasite multiplication in the brain. PMID: 27591508
  45. Aerobic interval training enhanced the anti-inflammatory indices IL-10/TNF-alpha ratio and IL-15 expression in skeletal muscle in tumor-bearing mice. PMID: 27863332
  46. Findings suggest that activation of the Tnf-Aicda axis and co-inhibitory signals to T cells in coordination with Th1-type immunity has critical roles in the immune response against Hepatitis B virus infection. PMID: 28063995
  47. Taken together, we speculate that DT-13 inhibits endothelium vascular inflammation through regulating nitric oxide production and the expression of ROS, TNFR, IL-8, MCP-1, which are associated with inflammation. PMID: 29162452
  48. TNF signaling is required for the expansion and differentiation of pathogenic IFNgamma+CD4+ T cells that promote the irreversible loss of bone marrow function. PMID: 28671989
  49. Drugs targeting XIAP and cIAP1/2 may be effective for osteosarcoma patients whose tumors express abundant RIPK1 and contain high levels of TNFalpha. PMID: 27129149
  50. Taken together, we indicated that anti-IL-6 and anti-TNF-alpha therapy prevents intestinal permeability induced by intestinal inflammation. PMID: 27155817

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Database Links

KEGG: mmu:21926

STRING: 10090.ENSMUSP00000025263

UniGene: Mm.1293

Protein Families
Tumor necrosis factor family
Subcellular Location
Cell membrane; Single-pass type II membrane protein.; [Tumor necrosis factor, membrane form]: Membrane; Single-pass type II membrane protein.; [Tumor necrosis factor, soluble form]: Secreted.; [C-domain 1]: Secreted.; [C-domain 2]: Secreted.

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Applications : WB

Sample dilution: 1: 500

Review: The protein expression of TNF-α (0.53 ± 0.11 vs. 1.16 ± 0.19), FasL (0.31 ± 0.04 vs. 1.05 ± 0.17), and TRAIL (0.36 ± 0.07 vs. 0.97 ± 0.05) in HTR-8/SVneo cells were also decreased in the H-MEG3 group compared with the NC group. ***p < 0.001, **p < 0.01, *p < 0.05 by two-way ANOVA.

Q&A

What is TNF and how do TNF antibodies work at the molecular level?

TNF (Tumor Necrosis Factor) is a crucial cytokine involved in inflammatory processes within the human body. It functions as a chemical messenger released primarily by white blood cells, including macrophages, T lymphocytes, and natural killer cells . At the molecular level, TNF works by triggering inflammation as part of the immune response to potential threats like infections or injuries.

TNF antibodies, more precisely known as TNF inhibitors (TNFi), are therapeutic proteins designed to bind to TNF molecules, preventing them from interacting with their receptors and thereby inhibiting the inflammatory cascade. Most TNF inhibitors are monoclonal antibody-based proteins containing complementary determining regions (CDRs) that form the TNF binding region . These hypervariable loops are unique to each antibody clone and constitute the primary binding site for TNF, effectively neutralizing its pro-inflammatory activity.

What are the main types of anti-TNF antibodies used in research and clinical settings?

Several types of TNF inhibitors are used in both research and clinical settings, each with unique structural and pharmacokinetic properties. The main types include:

  • Monoclonal antibody TNF inhibitors:

    • Infliximab: A chimeric monoclonal antibody containing mouse and human protein sequences

    • Adalimumab: A fully human monoclonal antibody

    • Golimumab: A fully human monoclonal antibody

    • Certolizumab pegol: A PEGylated Fab fragment of a humanized monoclonal antibody

  • Receptor fusion protein:

    • Etanercept: A fusion protein combining the TNF receptor with an IgG Fc portion

These TNF inhibitors differ in their immunogenicity profiles, with etanercept demonstrating lower immunogenicity than the monoclonal antibody-based inhibitors . This difference is attributed to etanercept's unique structure, which lacks the idiotype region that typically serves as the primary target for anti-drug antibodies (ADAs) in monoclonal antibody therapeutics.

How are TNF antibodies measured in experimental and clinical settings?

The measurement of TNF antibodies, particularly anti-drug antibodies (ADAs) against TNF inhibitors, has evolved significantly over time. Two main types of assays are used:

  • Drug-sensitive assays: Earlier studies primarily used these assays, which can only detect ADAs in the absence of the drug. When drug is present in serum, it forms complexes with ADAs, shielding binding sites and preventing detection, resulting in underestimation of immunogenicity .

  • Drug-tolerant assays: More recent assays have improved drug tolerance, allowing for ADA detection even in the presence of some drug. These assays provide a more accurate assessment of immunogenicity, though they are still affected by drug levels to varying extents .

For clinical applications, commercial assays are available for quantitating anti-drug antibodies, though currently primarily for infliximab and adalimumab . These assays typically use ELISA (Enzyme-Linked Immunosorbent Assay) methods, with clinical significance thresholds established through research. For example, studies have determined that antibodies to infliximab in titers ≥ 8 mcg/mL or antibodies to adalimumab ≥ 3 mcg/mL (using ELISA) are associated with reduced duration of drug effect or active disease .

Additionally, researchers may measure neutralizing antibodies (NAbs) versus non-neutralizing antibodies (BAbs) using functional assays, though the clinical relevance of this distinction has been questioned for monoclonal antibody therapeutics .

What is the relationship between TNF, inflammation, and disease?

TNF plays a pivotal role in the inflammatory process and is implicated in numerous inflammatory and autoimmune diseases. The relationship between TNF, inflammation, and disease is multifaceted:

Excessive or persistent TNF production is associated with multiple inflammatory diseases, including:

  • Rheumatoid arthritis

  • Psoriatic arthritis

  • Juvenile arthritis

  • Ankylosing spondylitis

  • Inflammatory bowel disease (IBD)

  • Psoriasis

  • Noninfectious uveitis

Beyond these classic inflammatory conditions, TNF is also linked to insulin resistance, which can lead to type 2 diabetes. Research indicates that obesity increases TNF production, contributing to insulin resistance as cells become less responsive to insulin's effects .

TNF mediates inflammation through multiple mechanisms, including activation of other inflammatory cytokines, upregulation of adhesion molecules, and promotion of tissue remodeling. The persistent activation of these pathways in chronic inflammatory diseases leads to the characteristic symptoms and tissue damage associated with these conditions, establishing TNF as a key therapeutic target.

What factors influence immunogenicity of TNF inhibitors in research models?

Immunogenicity of TNF inhibitors is influenced by multiple factors related to both the drug properties and patient characteristics. Understanding these factors is crucial for research design and interpretation:

Drug-related factors:

  • Structural composition: Higher murine (mouse) content in antibodies triggers greater ADA formation. Chimeric monoclonal antibodies like infliximab have higher immunogenicity than fully humanized antibodies .

  • Physical characteristics: The presence of aggregates increases immunogenicity, as does the tendency to form such aggregates during storage or administration .

  • Route of administration: Different administration routes affect immunogenic potential, with intravenous administration generally associated with lower immunogenicity than subcutaneous routes .

  • Dosing regimen: Episodic dosing (as opposed to maintenance dosing) increases immunogenicity risk, as does lack of induction dosing at treatment initiation .

  • Molecular design: The presence of unique epitopes not found in endogenous human proteins increases immunogenicity. Etanercept's lower immunogenicity is attributed to its fewer non-self epitopes compared to monoclonal antibodies .

Patient-related factors:

  • Concomitant immunomodulator use: Studies have shown that concurrent use of immunomodulators (like methotrexate) reduces ADA formation, suggesting this as a strategy to prevent immunogenicity .

  • Genetic factors: Certain genetic alleles may predispose patients to develop ADAs against TNF inhibitors, though this area requires further research .

  • Pre-existing immune status: A patient's baseline immune function and previous exposure to similar biologics can influence ADA development.

Understanding these factors enables researchers to design studies that either control for these variables or specifically examine their effects on immunogenicity outcomes.

How do different assay methods affect the detection and interpretation of anti-TNF antibodies?

The choice of assay methodology significantly impacts the detection and interpretation of anti-TNF antibodies, creating challenges for data comparison across studies:

Drug interference and assay sensitivity:
Drug-tolerant versus drug-sensitive assays reveal markedly different immunogenicity profiles for the same TNF inhibitor. Drug-sensitive assays only detect ADAs in samples with minimal free drug, underestimating ADA prevalence, while drug-tolerant assays detect ADAs regardless of drug presence, providing more comprehensive immunogenicity assessment . This distinction explains why studies using drug-tolerant assays report weaker associations between ADAs and clinical inefficacy compared to those using drug-sensitive assays.

Assay formats and their implications:

  • ELISA (Enzyme-Linked Immunosorbent Assay): Commonly used but susceptible to drug interference and may miss low-affinity antibodies.

  • Radioimmunoassay (RIA): Often more sensitive than ELISA but uses radioactive materials and is more complex.

  • Electrochemiluminescence (ECL): Provides increased sensitivity with wider detection ranges.

  • Cell-based assays: Used primarily for neutralizing antibody detection but are often less sensitive than binding assays, potentially misclassifying samples with low ADA titers as "non-neutralizing" when they may simply be below detection threshold .

The threshold for clinical significance varies by assay type. Research has established specific clinical thresholds for antibodies to infliximab (≥ 8 mcg/mL) and adalimumab (≥ 3 mcg/mL) using ELISA methodology, with these levels correlating with reduced drug efficacy .

When comparing immunogenicity data across studies, researchers must account for these methodological differences, as inconsistent results for the same drug are often attributable to assay variations rather than true biological differences.

What is the importance of distinguishing between neutralizing and non-neutralizing anti-TNF antibodies?

The distinction between neutralizing antibodies (NAbs) and non-neutralizing antibodies (binding antibodies or BAbs) has traditionally been considered important but is increasingly questioned in the context of TNF inhibitor research:

Traditional classification:

  • Neutralizing antibodies (NAbs): Directly bind the pharmacologically active site of the drug, physically preventing target binding.

  • Non-neutralizing antibodies (BAbs): Bind the drug at sites that don't interfere with target binding but may increase drug clearance through immune complex formation .

Challenges to this distinction:
Recent research suggests this distinction may be less meaningful than previously thought for several reasons:

  • Epitope targeting evidence: Serological studies demonstrate that 90-97% of ADAs against TNF inhibitors bind at or near the TNF binding site, as evidenced by TNF competing with ADAs for drug binding. This suggests that most ADAs have at least some neutralizing potential .

  • Concentration dependence: Neutralization is concentration-dependent. ADAs classified as "non-neutralizing" in assays may simply be present at insufficient concentrations to demonstrate measurable neutralization under test conditions but could neutralize in vivo at different concentrations .

  • Assay limitations: NAb assays, particularly cell-based ones, are often less sensitive than binding assays. Samples with low ADA titers may test positive in ADA assays but negative in NAb assays, potentially leading to misclassification as "non-neutralizing" when the issue is actually assay sensitivity .

  • Crystal structure evidence: Structural studies of monoclonal ADAs against therapeutic antibodies (including natalizumab) show that both "neutralizing" and "non-neutralizing" ADAs occupy the same physical space as the drug target, suggesting both types could be neutralizing given sufficient concentrations .

Recent studies suggest that whenever an ADA response to therapeutic antibodies is detected, most ADAs will have some neutralizing capacity. Therefore, the functional impact on drug efficacy is more dependent on ADA concentration, affinity, and the relative concentrations of drug and target than on a binary classification of neutralizing versus non-neutralizing .

How can TNF antibodies be optimized for specific research applications?

Optimizing TNF antibodies for specific research applications requires consideration of multiple factors to ensure both specificity and functionality:

Epitope selection and targeting:
When developing TNF antibodies for research, identifying the specific epitope to target is crucial. Different TNF epitopes may be more accessible in certain experimental conditions or may be conserved across species if cross-reactivity is desired. Computational approaches combined with epitope mapping can identify optimal target regions for specific research questions.

Antibody format considerations:

  • Full-length antibodies: Provide bivalent binding and Fc-mediated functions, useful for applications requiring effector functions.

  • Fab fragments: Smaller size allows better tissue penetration but lacks effector functions.

  • Single-chain variable fragments (scFv): Even smaller, with potentially better tissue access for imaging or localized studies.

  • Bispecific antibodies: Enable simultaneous targeting of TNF and another molecule of interest, valuable for mechanistic studies.

Affinity and specificity optimization:
Based on the search results, we understand that anti-TNF antibodies primarily target the idiotype regions (complementarity determining regions) of therapeutic TNF inhibitors . Similarly, when developing research antibodies against TNF itself, optimizing affinity while maintaining specificity is essential. This can be achieved through:

  • Affinity maturation: Using directed evolution or rational design to increase binding strength.

  • Cross-reactivity testing: Comprehensive screening against related proteins to ensure specificity.

  • Stability engineering: Modifying antibody structure to improve stability under experimental conditions.

Application-specific optimizations:

  • For immunohistochemistry: Optimizing fixation compatibility and tissue penetration.

  • For flow cytometry: Ensuring brightness and minimal background binding.

  • For neutralization assays: Confirming functional blocking without interference from experimental buffers.

  • For in vivo imaging: Considering half-life, biodistribution, and signal-to-noise ratio.

Researchers should validate optimized antibodies using multiple complementary techniques, including both binding assays and functional readouts relevant to their specific research questions.

What are the optimal experimental controls when using TNF antibodies?

Robust experimental design with appropriate controls is essential when working with TNF antibodies to ensure reliable and interpretable results:

Essential controls for TNF antibody experiments:

  • Isotype controls:

    • Include matched isotype control antibodies (same species, isotype, and concentration as the TNF antibody)

    • Essential for distinguishing specific binding from Fc-receptor mediated or other non-specific interactions

    • Particularly important in flow cytometry, immunohistochemistry, and immunoprecipitation

  • Positive controls:

    • Samples known to express TNF (e.g., LPS-stimulated macrophages)

    • Cell lines engineered to overexpress TNF

    • Recombinant TNF protein for binding assays

    • Critical for confirming that negative results reflect true absence of target rather than assay failure

  • Negative controls:

    • TNF-knockout cells or tissues (when available)

    • Untreated/unstimulated samples for induced TNF expression

    • Competitive blocking with excess unlabeled antibody or recombinant TNF

    • Help establish background levels and confirm specificity

  • Antibody titration:

    • Performing dose-response experiments with varying antibody concentrations

    • Identifies optimal antibody concentration for specific signal without background

    • Particularly important when applying TNF antibodies to new experimental systems

  • Method-specific controls:

    • For western blotting: molecular weight markers and loading controls

    • For immunoprecipitation: pre-immune serum controls

    • For neutralization assays: dose-response curves with standard TNF concentrations

When studying anti-drug antibodies against TNF inhibitors, additional controls become necessary:

  • Drug competition assays to confirm specificity of detected ADAs

  • Samples with known ADA titers as reference standards

  • Multiple assay formats to overcome limitations of any single approach, particularly when drug interference is a concern

These controls not only validate experimental findings but also help troubleshoot when unexpected results occur, enabling researchers to distinguish technical issues from genuine biological effects.

How should TNF antibody studies account for immunogenicity in longitudinal experiments?

Longitudinal studies using TNF antibodies, particularly in animal models or when monitoring anti-TNF therapies, must address immunogenicity challenges to ensure reliable results:

Study design considerations:

  • Sampling frequency and timing:

    • Establish baseline measurements before antibody administration

    • Schedule regular sampling at consistent intervals to capture the dynamics of immune responses

    • Include more frequent sampling during early exposure phases when immunogenicity often develops

  • Statistical planning:

    • Calculate sample sizes accounting for expected dropout rates due to immunogenicity

    • Plan for stratified analyses based on immunogenicity status

    • Consider paired analyses (before/after immunogenicity development)

Laboratory and analytical approaches:

  • Monitoring anti-drug antibody development:

    • Implement routine screening for ADAs throughout the study duration

    • Use drug-tolerant assays when possible to avoid underestimating immunogenicity

    • Measure both the presence and titer of ADAs to assess response magnitude

  • Drug level monitoring:

    • Regularly measure TNF inhibitor levels alongside ADA measurements

    • Correlate drug levels with efficacy endpoints and ADA development

    • Consider therapeutic drug monitoring (TDM) approaches similar to clinical practice

  • Strategies to minimize immunogenicity impact:

    • Consider concomitant immunomodulator use, which has been shown to reduce ADA formation

    • Implement maintenance dosing rather than episodic administration, as episodic dosing increases immunogenicity risk

    • In animal models, consider using species-matched antibodies to reduce immunogenicity

Data interpretation approaches:

  • Subgroup analyses:

    • Analyze results separately for ADA-positive and ADA-negative subjects

    • Consider time-to-ADA development as an endpoint

    • Examine dose-response relationships within ADA subgroups

  • Advanced modeling:

    • Implement pharmacokinetic/pharmacodynamic models accounting for ADA development

    • Consider machine learning approaches to identify predictors of immunogenicity

    • Model the impact of ADA titers on drug clearance rates

What are the methodological considerations for studying TNF antibody-antigen interactions?

Understanding TNF antibody-antigen interactions requires specialized methodological approaches that can provide detailed insights into binding characteristics and functional consequences:

Binding affinity and kinetics assessments:

  • Surface Plasmon Resonance (SPR):

    • Provides real-time measurement of association and dissociation rates

    • Calculates equilibrium dissociation constants (KD values)

    • Can assess how structural modifications affect binding properties

    • Useful for comparing multiple antibody candidates

  • Bio-Layer Interferometry (BLI):

    • Similar to SPR but with different detection principles

    • Allows for higher throughput screening of multiple antibodies

    • More tolerant of crude samples than some other methods

  • Isothermal Titration Calorimetry (ITC):

    • Measures thermodynamic parameters of binding

    • Provides insights into enthalpy and entropy contributions

    • Solution-based method avoiding surface immobilization artifacts

Epitope mapping approaches:

  • Hydrogen-Deuterium Exchange Mass Spectrometry (HDX-MS):

    • Identifies regions protected from exchange upon antibody binding

    • Maps conformational epitopes that may not be evident from sequence alone

  • X-ray Crystallography and Cryo-EM:

    • Provides atomic-level detail of antibody-antigen complexes

    • Reveals precise epitope-paratope interactions

    • Guides structure-based optimization approaches

  • Peptide Arrays and Mutagenesis:

    • Systematically identifies critical binding residues

    • Distinguishes primary binding sites from secondary contacts

    • Useful for comparing epitopes recognized by different antibodies

Functional interaction assessments:

  • Neutralization Assays:

    • Cell-based assays measuring inhibition of TNF-induced effects

    • Quantifies functional consequences of antibody binding

    • Important complement to binding assays

  • Competition Assays:

    • Determines whether antibodies compete for the same epitope

    • Useful for classifying antibodies into bins by epitope

    • Can identify antibodies that might synergize when used in combination

Research has shown that anti-drug antibodies primarily target the idiotype (variable region) of TNF inhibitors, with serological studies demonstrating that 90-97% of ADAs compete with TNF for binding to the drug . This indicates that most ADAs target regions at or near the TNF binding site, highlighting the importance of epitope mapping in understanding immunogenicity.

Additionally, crystal structure studies of therapeutic antibodies and their ADAs have demonstrated that even ADAs classified as "non-neutralizing" in functional assays occupy the same physical space as the drug target, suggesting potential neutralizing capacity given sufficient concentrations .

How can researchers effectively measure TNF antibody-mediated immune complex formation?

Immune complex formation between TNF antibodies and their targets plays a crucial role in both clearance mechanisms and potential adverse effects. Effective measurement requires specialized techniques:

Direct immune complex detection methods:

  • Size Exclusion Chromatography (SEC):

    • Separates immune complexes based on molecular size

    • Can distinguish monomeric antibodies from various complex forms

    • Allows quantification of different complex populations

    • May be coupled with multi-angle light scattering (SEC-MALS) for more detailed characterization

  • Precipitation-based techniques:

    • Polyethylene glycol (PEG) precipitation of immune complexes

    • C1q binding assays (C1q binds preferentially to antibody complexes)

    • Protein A/G precipitation followed by analytical methods

  • Analytical ultracentrifugation:

    • Provides detailed size distribution of immune complexes

    • Allows determination of complex stoichiometry

    • Less affected by complex dissociation during analysis than some other methods

Imaging approaches:

  • Electron microscopy:

    • Direct visualization of immune complex structure

    • Can reveal complex heterogeneity and morphology

    • May be combined with immunogold labeling for specific component identification

  • Dynamic light scattering (DLS):

    • Measures size distribution of particles in solution

    • Tracks changes in complex formation over time

    • Relatively simple and rapid approach

Functional consequences of immune complex formation:

  • Clearance rate assessment:

    • Pharmacokinetic studies measuring altered drug half-life

    • Comparison between ADA-positive and ADA-negative samples

    • Correlation between ADA levels and drug clearance rates

  • Fc receptor binding assays:

    • Measures engagement of immune complexes with Fc receptors

    • Predicts potential for immune cell activation

    • May help understand mechanisms of immunogenicity-related adverse events

In the context of TNF inhibitors, research has demonstrated that anti-drug antibodies can increase drug clearance via immune complex formation . This mechanism operates independently of whether the ADAs directly neutralize the drug's ability to bind TNF.

For TNF inhibitor therapeutics, immune complex formation contributes to decreased drug levels and reduced clinical efficacy . Testing for both ADAs and drug levels provides more complete information than either measurement alone, as it allows researchers to assess both the presence of an immune response and its functional impact on drug availability.

How should researchers interpret conflicting TNF antibody data from different assay platforms?

When faced with conflicting TNF antibody data from different assay platforms, researchers should implement a systematic approach to reconciliation and interpretation:

Sources of inter-assay variability:

  • Drug interference differences:

    • Drug-sensitive versus drug-tolerant assays yield fundamentally different results

    • Drug-sensitive assays detect ADAs only in the absence of drug, underestimating immunogenicity

    • Drug-tolerant assays detect ADAs even in the presence of drug, providing more comprehensive assessment

  • Detection sensitivity variations:

    • NAb assays (especially cell-based) are often less sensitive than ADA assays

    • Samples with low ADA titers may be deemed positive by binding assays but negative by neutralization assays

    • This can create the misleading impression of "non-neutralizing" antibodies when the issue is actually assay sensitivity

  • Format-specific artifacts:

    • Solid-phase assays (like ELISA) may detect different antibody subsets than liquid-phase assays

    • Cell-based assays reflect the complex cellular environment but introduce additional variables

    • Some formats may preferentially detect high-affinity antibodies while missing low-affinity responses

Reconciliation approaches:

  • Correlation analysis:

    • Plot results from different assays against each other

    • Identify systematic biases or thresholds that explain discrepancies

    • Develop conversion factors where appropriate

  • Orthogonal validation:

    • When assays disagree, implement a third method as a tiebreaker

    • Focus on functional outcomes rather than just binding measurements

    • Consider the specific question being addressed when weighing conflicting data

  • Contextual interpretation:

    • Interpret immunogenicity results in the context of clinical outcomes or experimental endpoints

    • Consider drug levels alongside ADA measurements

    • Remember that the ultimate relevance of ADAs is their impact on drug efficacy

Practical recommendations:

  • Standardized reporting:

    • Always report the specific assay methodology used

    • Include details on drug tolerance, sensitivity limits, and positive thresholds

    • Present raw data alongside interpreted results when possible

  • Multi-assay approaches:

    • Use complementary assays with different principles when possible

    • Report results from all assays rather than selecting only "favorable" data

    • Acknowledge limitations of each approach

Research has demonstrated that the relationship between ADAs and clinical efficacy varies dramatically depending on the assay used. Studies using drug-sensitive assays report strong associations between ADAs and loss of response, while studies using drug-tolerant assays find much weaker associations . Understanding this methodological impact is essential when interpreting seemingly conflicting results across studies.

What statistical approaches are recommended for analyzing variable TNF antibody responses?

Analyzing variable TNF antibody responses requires sophisticated statistical approaches that account for the complex, often non-normal distribution of immunological data:

Descriptive statistics and data visualization:

  • Distribution characterization:

    • Test for normality using Shapiro-Wilk or Kolmogorov-Smirnov tests

    • Present median and interquartile range for non-normally distributed ADA titers

    • Consider log transformation for skewed distributions

  • Visualization techniques:

    • Box plots showing distribution of ADA responses across groups

    • Spaghetti plots for longitudinal data showing individual trajectories

    • Heat maps correlating multiple immune parameters

Statistical testing approaches:

  • For comparing ADA incidence:

    • Chi-square or Fisher's exact test for categorical comparisons

    • Time-to-event analysis (Kaplan-Meier) for ADA development

    • Cox proportional hazards for identifying risk factors

  • For comparing ADA titers:

    • Non-parametric tests (Mann-Whitney U, Kruskal-Wallis) for non-normal distributions

    • Mixed effects models for longitudinal data

    • ANOVA with post-hoc testing for normally distributed data after transformation

  • For correlating ADAs with outcomes:

    • Spearman rank correlation for continuous variables

    • Logistic regression for binary outcomes

    • Survival analysis for time-to-event outcomes like treatment failure

Advanced analytical methods:

  • Multivariate approaches:

    • Principal component analysis to identify patterns in immune response data

    • Cluster analysis to identify patient subgroups with similar response patterns

    • Machine learning algorithms to predict ADA development from baseline variables

  • Pharmacokinetic/pharmacodynamic modeling:

    • Population PK models incorporating ADA status as a covariate

    • Exposure-response models relating drug levels to outcomes

    • Mixed-effects modeling to account for inter-individual variability

Special considerations for TNF antibody data:

  • Handling measurements below detection limit:

    • Appropriate imputation methods for values below detection threshold

    • Consideration of detection limits when comparing across studies

  • Accounting for drug interference:

    • Stratified analysis based on drug levels

    • Statistical approaches that incorporate drug levels as covariates

    • Selection of appropriate analysis methods based on assay drug tolerance

Research has shown variable ADA development rates across different TNF inhibitors, with predictive factors including medication type, dosing schedule, and concomitant immunomodulator use . These complex relationships necessitate statistical approaches that can account for multiple variables and their interactions to provide meaningful insights.

How can researchers correlate TNF antibody development with clinical or experimental outcomes?

Establishing correlations between TNF antibody development and outcomes requires careful methodological approaches that account for the complexity of immune responses:

Study design considerations for robust correlation analysis:

  • Temporal sampling strategies:

    • Implement scheduled longitudinal sampling before outcome assessment

    • Include samples at baseline, early treatment phase, and at outcome measurement

    • Consider more frequent sampling in subjects showing early signs of ADA development

  • Outcome definition precision:

    • Clearly define primary and secondary outcomes before analysis

    • Use validated and standardized outcome measures where available

    • Consider both objective measures and patient-reported outcomes

Correlation methodologies:

  • Direct correlation approaches:

    • Correlate ADA titers with continuous outcome measures using appropriate statistical tests

    • Assess ADA status (positive/negative) in relation to categorical outcomes

    • Implement time-to-event analysis correlating ADA development with outcome occurrence

  • Multivariate models:

    • Include other relevant variables (baseline disease activity, concomitant medications)

    • Control for confounding factors through statistical adjustment

    • Test for interaction effects between ADA status and other variables

  • Mediation analysis:

    • Test whether ADA effects on outcomes are mediated through reduced drug levels

    • Implement structural equation modeling to assess direct and indirect effects

    • This approach can distinguish between neutralizing effects and increased clearance mechanisms

Evidence-based correlation frameworks:

Research has established that anti-drug antibodies against TNF inhibitors are associated with:

  • Reduced duration of response to the drug

  • Decreased drug levels

  • Clinical flares

  • Loss of response

  • Discontinuation of therapy

  • Studies using drug-sensitive assays show strong associations between ADAs and loss of response

  • Studies using drug-tolerant assays demonstrate weaker associations

This difference occurs because drug-sensitive assays only detect ADAs in the absence of drug, creating an inherent correlation with low drug levels, while drug-tolerant assays detect ADAs regardless of drug presence.

Importantly, research suggests that reduced clinical efficacy is primarily related to inadequate drug levels rather than the presence of ADAs per se . This highlights the importance of measuring both ADAs and drug levels when investigating correlations with outcomes, as the relationship between these factors is complex and interconnected.

What are the best practices for reporting TNF antibody research results?

Comprehensive and transparent reporting of TNF antibody research is essential for interpretation, reproducibility, and cross-study comparisons:

Essential methodological reporting elements:

  • Antibody characterization details:

    • Complete source information (vendor, catalog number, lot number)

    • Isotype, species, and clonality (monoclonal/polyclonal)

    • For custom antibodies: detailed production and validation methods

    • Concentration and format used in experiments

  • Assay methodology specification:

    • Explicit description of assay format (ELISA, RIA, ECL, cell-based, etc.)

    • Clear statement of drug tolerance characteristics

    • Detection limits and dynamic range of the assay

    • Definition of positive thresholds with justification

    • Detailed protocol information enabling reproduction

Results reporting standards:

  • Quantitative data presentation:

    • Report both percentages of subjects developing ADAs and quantitative titer information

    • Include measures of central tendency and dispersion appropriate to data distribution

    • Present raw data in supplementary materials when feasible

    • Use appropriate visualization methods for complex data relationships

  • Temporal considerations:

    • Clearly report timing of measurements relative to treatment initiation

    • Specify whether reported ADA rates represent cumulative or point prevalence

    • Include time-to-ADA development data when available

  • Contextual information:

    • Report drug levels alongside ADA measurements

    • Include relevant clinical or experimental outcome data

    • Report potential confounding variables (concomitant medications, disease severity)

Interpretation guidance:

  • Assay limitations acknowledgment:

    • Discuss the impact of assay characteristics on results interpretation

    • Address potential sources of false positives and false negatives

    • Consider how drug interference might affect interpretation

  • Clinical relevance assessment:

    • Distinguish between statistical significance and clinical relevance

    • Discuss findings in the context of established clinically significant thresholds

    • Consider the relationship between measured ADAs and functional outcomes

Research has demonstrated that interpretation of ADA measurements must consider the assay context. Drug-sensitive assays inherently correlate more strongly with clinical outcomes because they detect ADAs only in the absence of drug, while drug-tolerant assays show weaker associations because they detect ADAs regardless of drug presence .

The field increasingly recognizes that the distinction between neutralizing and non-neutralizing antibodies may be less meaningful than previously thought, as most ADAs target the idiotype region and have at least some neutralizing potential given sufficient concentrations . This evolving understanding should be reflected in result interpretation and reporting.

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