TOR1 Antibody

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Product Specs

Buffer
Preservative: 0.03% ProClin 300
Components: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 Weeks (Made-to-Order)
Synonyms
TOR1 antibody; CN antibody; SPR2 antibody; At4g27060 antibody; T24A18.10 antibody; Microtubule-associated protein TORTIFOLIA1 antibody; Microtubule-associated protein SPIRAL2 antibody; Protein CONVOLUTA antibody
Target Names
TOR1
Uniprot No.

Target Background

Function

This antibody targets a plant-specific microtubule-associated protein (MAP) that regulates cortical microtubule orientation and subsequent organ growth direction. It modulates microtubule severing, thereby influencing microtubule organization.

Gene References Into Functions

Relevant Research:

  1. TOR1's role in stabilizing microtubule crossovers, supporting viral RNA complex formation and intercellular spread. PMID: 25133612
  2. SPIRAL2 (SPR2) function in growth, chromosome mapping, amino acid sequence, and phylogenetic relationships with other Arabidopsis proteins. PMID: 15557095
  3. SPR2 and its close homolog SP2L exhibit partially overlapping expression patterns across various tissues. spr2-sp2l double mutants demonstrate enhanced right-handed helical growth. PMID: 18577573
Database Links

KEGG: ath:AT4G27060

STRING: 3702.AT4G27060.1

UniGene: At.32124

Subcellular Location
Cytoplasm, cytoskeleton. Note=Bound to microtubules.
Tissue Specificity
Expressed in roots, hypocotyls, stems, flowers, siliques, inflorescences, petioles, cotyledons, and leaves. Particularly present in root tips and shoot meristems.

Q&A

Table 1: Common Methodological Pitfalls and Solutions

IssueSolutionExample Study
Cross-reactivity with TORC2 componentsUse conditional knockouts or isoform-specific antibodiesCo-IP assays distinguishing TOR1-Raptor vs. TOR2-AVO3 interactions
Non-specific staining in immunofluorescenceOptimize blocking buffers (e.g., 5% BSA + 0.1% Triton X-100)Rab1A-mTORC1 Golgi localization required stringent blocking
Variability in protein synthesis assaysStandardize 35S-methionine incorporation protocolsQuantified protein synthesis rates in TOR1-depleted trypanosomes

How do spatial localization patterns impact TOR1 antibody utility in cancer studies?

  • Golgi-localized TORC1: Antibodies must distinguish between cytoplasmic and Golgi pools. In colorectal cancer, Rab1A-mTORC1 interactions occurred specifically in the Golgi, requiring high-resolution imaging .

  • Nuclear vs. cytoplasmic roles: Validate with fractionation assays. TOR1 regulates RNA Pol I localization in the nucleolus, necessitating nuclear-cytoplasmic separation .

What advanced techniques resolve contradictions in TOR1-mediated signaling data?

  • Proximity ligation assays (PLA): Detect direct protein interactions in situ, reducing false positives from co-IP .

  • Single-cell RNA sequencing: Identify heterogeneity in TOR1 expression across cell populations, addressing variability in bulk assays .

  • CRISPR-Cas9 tagging: Endogenously tag TOR1 to bypass antibody limitations in certain models .

How can researchers optimize TOR1 antibody protocols for non-model organisms?

  • Epitope mapping: Compare conserved regions across species. For example, TbTOR1 shares 28% identity with human mTOR, requiring custom antibody validation .

  • Cross-validation: Use orthogonal methods (e.g., metabolic labeling for protein synthesis) to confirm antibody-based findings .

What biomarkers correlate with TOR1 antibody efficacy in preclinical models?

BiomarkerApplicationSource
Phospho-S6K (Thr389)TORC1 activity readoutValidated in mTORC1 hyperactivation studies
LC3-II/LC3-I ratioAutophagy inductionUsed in TOR1-depletion models
Nucleolar integrityRNA Pol I activityAssessed via DAPI/TbRPA1 co-staining

How do post-translational modifications affect TOR1 antibody performance?

  • Phosphorylation at regulatory sites (e.g., Ser/Thr residues) can alter epitope accessibility. Use phosphatase-treated lysates to assess modification-dependent binding .

  • Ubiquitination or SUMOylation may require specialized lysis buffers (e.g., inclusion of N-ethylmaleimide) .

What computational tools enhance TOR1 antibody experimental design?

  • Structural prediction software (AlphaFold, PyMOL): Model TOR1-antibody binding interfaces to guide epitope selection .

  • Image analysis pipelines (CellProfiler, Fiji): Quantify subcellular localization patterns from immunofluorescence data .

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