uev-3 Antibody

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Description

Introduction to UEV-3 and Its Antibody

UEV-3 is a ubiquitin-conjugating enzyme variant that lacks the catalytic cysteine residue required for ubiquitin transfer but retains structural motifs critical for interactions within the ubiquitination machinery. In C. elegans, UEV-3 functions in the DLK-1 MAPK pathway, regulating synaptic architecture and axon termination by interacting with kinases like PMK-3 and MAK-2 . The UEV-3 antibody enables researchers to investigate its expression, localization, and mechanistic roles in neuronal development and disease models.

Development and Validation of UEV-3 Antibody

The commercially available anti-UEVLD antibody (Sigma-Aldrich, SAB4502309) is a rabbit-derived polyclonal antibody raised against a peptide corresponding to residues 141–190 of human UEVLD (UniProt accession: Q8IX28). Key validation data includes:

ParameterSpecification
Host SpeciesRabbit
ReactivityHuman
ApplicationsWB (1:500–1:1000), IHC (1:50–1:100), ELISA (1:40000)
Molecular Weight~52 kDa (antigen)
Immunogen RangeAmino acids 141–190
Storage Conditions-20°C in aqueous buffered solution

This antibody has been validated for specificity in Western blotting and immunohistochemistry, with no cross-reactivity reported against related UEV proteins like UEV-1 or UEV-2 .

Role in Neuronal Development

UEV-3 operates cell-autonomously in neurons, as demonstrated in C. elegans studies where uev-3 loss-of-function suppressed synaptic defects in rpm-1 mutants. The antibody could localize UEV-3 to cytosolic and nuclear compartments in transgenic models, supporting its role in DLK-1 pathway regulation .

Interaction with MAP Kinases

UEV-3 binds the p38 MAPK PMK-3, potentially modulating substrate specificity or kinase activation. Co-immunoprecipitation assays using UEV-3 antibodies confirmed this interaction, particularly with catalytically inactive PMK-3 mutants .

Therapeutic Potential

UEV-3’s homologs in humans (UEVLD) are explored for roles in viral budding (e.g., Ebola VP40 protein) and cancer. Inhibitors targeting UEV domains, such as UEV-10 and UEV-11, reduce viral replication by disrupting ESCRT complex interactions .

Technical Considerations

  • Experimental Optimization:

    • For Western blotting, use 1–5% BSA in blocking buffers to minimize background noise.

    • Antigen retrieval with citrate buffer (pH 6.0) is recommended for immunohistochemistry .

  • Limitations:

    • No cross-reactivity data available for non-human species beyond C. elegans and human cell lines.

    • The antibody’s performance in co-IP assays requires validation with kinase-active PMK-3 .

Future Directions

UEV-3 antibodies could advance studies on:

  1. Neurodevelopmental Disorders: Clarifying UEV-3’s role in synaptic vesicle trafficking.

  2. Antiviral Therapeutics: Targeting UEV-3 interactions in viral budding pathways .

  3. Cancer Biology: Investigating UEVLD’s involvement in tumor metastasis via integrin signaling .

Product Specs

Buffer
**Preservative:** 0.03% Proclin 300
**Constituents:** 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
uev-3 antibody; F26H9.7 antibody; Ubiquitin-conjugating enzyme E2 variant 3 antibody
Target Names
uev-3
Uniprot No.

Target Background

Function
UEV-3 is a potential negative regulator of polyubiquitination. It may modulate the activity of the p38 MAP kinase pnk-3. UEV-3 may play a role in axon termination and synaptic transmission at motor and mechanosensory neurons. Additionally, it has a role in intraflagellar transport in cilia and cilium length regulation.
Gene References Into Functions
  1. UEV-3 may enhance the specificity of the DLK-1 pathway by contributing to the activation of PMK-3 or limiting the substrates accessible to PMK-3. PMID: 20592265
Database Links

KEGG: cel:CELE_F26H9.7

STRING: 6239.F26H9.7

UniGene: Cel.18862

Protein Families
Ubiquitin-conjugating enzyme family
Subcellular Location
Nucleus. Cytoplasm. Cell projection, dendrite. Cell projection, axon. Cell projection, cilium.
Tissue Specificity
Expressed ubiquitously.

Q&A

Here’s a structured FAQ collection for researchers working with UEV-3 Antibody, incorporating experimental design considerations, data analysis challenges, and methodological guidance based on current literature:

Advanced Research Questions

  • How to resolve discrepancies in UEV-3 functional data across studies?

    • Case Analysis: In antiviral assays, UEV-3 showed no activity against EBOV/HIV-1 (IC50 >100 μM, Table 3) , despite its role in ubiquitination pathways. This suggests:

      • Context-dependent functionality (e.g., cell type-specific ESCRT recruitment) .

      • Off-target effects in viability assays (toxicity observed at >100 μM) .

    • Strategy: Pair antibody-based UEVLD knockdown with rescue experiments using wild-type vs. mutant UEVLD constructs to isolate phenotype contributions.

  • Can UEV-3 antibody differentiate between UEVLD isoforms in cancer models?

    • Design: Combine IHC with isoform-specific qPCR (e.g., primers targeting exon 4–5 junction). Use siRNA targeting conserved regions to assess cross-isoform effects.

    • Data Interpretation: Prioritize cell lines with endogenous UEVLD overexpression (e.g., SW480 colon carcinoma) to minimize background noise.

  • How to investigate UEVLD’s role in polyubiquitination regulation using this antibody?

    • Assay Design:

      1. Co-immunoprecipitate UEVLD with ubiquitin-conjugating enzymes (E2s) in HEK293T lysates .

      2. Quantify polyubiquitin chains via anti-K48-/K63-linkage antibodies in UEVLD-knockdown cells.

      • Key Controls: Include TSG101-UEV inhibitors (e.g., UEV-10/11) to dissect pathway crosstalk.

Mechanistic & Translational Questions

  • What explains UEV-3’s lack of antiviral activity despite targeting TSG101-UEV pathways?

    • Hypothesis: UEV-3 may stabilize TSG101-UEV conformations incompatible with viral budding (contrasting with destabilizing inhibitors like UEV-11) .

    • Testing: Perform DSF (differential scanning fluorimetry) with recombinant TSG101-UEV ± UEV-3 antibody to measure Tm shifts indicative of binding-induced stabilization/destabilization .

  • Can UEV-3 antibody be used to study ESCRT-independent roles of UEVLD?

    • Approach: Profile UEVLD interactomes (AP-MS) in:

      • Wild-type vs. ESCRT-depleted cells (e.g., VPS4 KO).

      • Disease models (e.g., cervical cancer spheroids) .

    • Analytical Focus: Identify lactate/malate dehydrogenase (LDH/MDH) domain interactors to explore metabolic cross-talk.

Data Table: Key Functional Comparisons

ParameterUEV-3 Antibody Small-Molecule UEV-3
Effective Conc.1:500–1:2000 (WB)>100 μM (Ineffective)
Toxicity (IC50)N/A>100 μM (A3R5,7 cells)
Pathway SpecificityUEVLD isoformsTSG101-UEV destabilizer

Methodological Notes

  • Multiplex Applications: Combine IF (1:50–1:200 dilution) with proximity ligation assays (PLA) to visualize UEVLD-protein interactions spatially.

  • CRITICAL: For functional studies, verify antibody lot-to-lot consistency using the same peptide immunogen (AA 141-190) .

  • Data Conflict Resolution: Cross-validate findings with orthogonal tools (e.g., de novo designed antibodies from JAM for epitope-specific targeting) .

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