ubl-5 Antibody

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Product Specs

Buffer
**Preservative:** 0.03% Proclin 300
**Constituents:** 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
ubl-5 antibody; F46F11.4 antibody; Ubiquitin-like protein 5 antibody
Target Names
ubl-5
Uniprot No.

Target Background

Function
Ubiquitin-like protein 5 (UBL-5) is involved in the mitochondrial unfolded protein response (mtUPR).
Database Links

KEGG: cel:CELE_F46F11.4

STRING: 6239.F46F11.4

UniGene: Cel.18696

Subcellular Location
Cytoplasm.

Q&A

Here’s a structured FAQ collection for UBL5 antibody research, incorporating methodological guidance and evidence-based insights from peer-reviewed literature and patents:

Advanced Research Questions

Q3: How do I resolve contradictions in UBL5 localization data across studies?

Methodological Answer:

  • Subcellular fractionation: Validate cytoplasmic vs. nuclear localization via differential centrifugation and marker proteins (e.g., Lamin B1 for nuclei) .

  • Post-translational modifications: Screen for ubiquitination or phosphorylation using PTM-specific antibodies .

  • Strain-specific variability: Compare results across mouse models (e.g., C57BL/6 vs. BALB/c) .

Observed DiscrepancyPotential CauseSolution
Nuclear vs. cytoplasmic stainingAntibody cross-reactivity with modified UBL5Use PTM-specific antibodies
Variable intensity across tissuesDifferential UBL5 expressionNormalize to housekeeping proteins

Q4: How can UBL5 antibodies be integrated into multiplex assays for pathway analysis?

Methodological Answer:

  • Panel design: Combine UBL5 with markers of stress response (e.g., HSP70) or ubiquitination (e.g., Proteasome 20S) .

  • Signal separation: Use fluorophores with non-overlapping emission spectra (e.g., AF488, AF647) for simultaneous detection .

  • Data normalization: Employ reference standards (e.g., recombinant UBL5) to calibrate inter-experiment variability .

Q5: What are the pitfalls in interpreting UBL5 antibody data in longitudinal studies?

Methodological Answer:

  • Antibody stability: Store aliquots at -20°C with 50% glycerol to prevent freeze-thaw degradation .

  • Batch variability: Validate each lot using standardized lysates (e.g., HEK293 overexpressing UBL5) .

  • Longitudinal drift: Include a reference sample in every experiment to monitor signal consistency .

Q6: How do I assess UBL5 antibody cross-reactivity in non-model organisms?

Methodological Answer:

  • Epitope alignment: Use Clustal Omega to compare human UBL5 epitopes with orthologs (e.g., zebrafish, Arabidopsis) .

  • Functional assays: Test antibody binding to recombinant proteins from target species .

  • Negative controls: Include tissues from UBL5-knockout organisms if available .

Table 1: Common UBL5 Antibody Issues and Solutions

IssueEvidenceSolution
Weak/no signal in IHCOver-fixation or epitope masking Optimize antigen retrieval (pH 9.0 TE buffer)
Bands >8.5 kDa in WBCross-reactivity with ubiquitinated proteins Use DTT to reduce disulfide bonds

Table 2: UBL5 Antibody Applications Across Species

SpeciesTested ApplicationsRecommended Dilution
HumanWB, IHC, ELISA1:50–1:500
MouseIHC (heart tissue)1:100
RatWB1:200

Key Citations

  • Humanized antibody design for reduced immunogenicity .

  • Antibody validation protocols to address reproducibility crises .

  • Cross-species reactivity in plant and mammalian systems .

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