At4g32940 Antibody

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Description

Antibody Structure and Specificity

The At4g32940 Antibody belongs to the IgG isotype, consisting of two heavy chains and two light chains with distinct functional domains:

  • Fab (Antigen-Binding Fragment): Recognizes the target protein via complementarity-determining regions (CDRs) on the variable domains .

  • Fc (Crystallizable Fragment): Facilitates interactions with effector molecules, though its role in this antibody is secondary to antigen binding .

As a polyclonal antibody, it binds to multiple epitopes on the Gamma-VPE protein, enhancing detection sensitivity in assays like Western blotting .

Target Protein: Gamma-VPE (At4g32940)

Gamma-VPE is a caspase-1-like asparaginyl endopeptidase localized to plant vacuoles. Key characteristics include:

PropertyDescriptionSource
Gene NameAt4g32940
Enzyme ActivityCleaves asparagine or aspartic acid residues; autocatalytic activation in vacuoles
FunctionProcesses seed storage proteins; mediates PCD during stress or development
Subcellular LocalizationLytic vacuoles in senescent tissues, seeds, and root tips

Gamma-VPE is critical for heat shock-induced PCD in Arabidopsis, with activation mediated by MPK6 kinase. Homologs like CgVPE1 in Citrus grandis show conserved roles in vacuole rupture during secretory cavity formation .

Applications in Research

The At4g32940 Antibody is validated for:

ApplicationPurposeKey FindingsSource
Western BlotDetects Gamma-VPE protein levels in Arabidopsis tissuesConfirms protein expression in senescent leaves and developing seeds
ELISAQuantifies Gamma-VPE in plant extractsMeasures enzyme activity during stress-induced PCD
ImmunolocalizationTracks subcellular distribution of Gamma-VPE in vacuolesDemonstrates colocalization with vacuolar markers during PCD

Role in Programmed Cell Death (PCD)

Gamma-VPE is activated during heat shock, triggering vacuole rupture and PCD in Arabidopsis. The At4g32940 Antibody has been used to:

  • Demonstrate MPK6-dependent activation of Gamma-VPE in thermally stressed plants.

  • Confirm caspase-1-like activity in PCD pathways, bridging plant and animal apoptosis mechanisms .

Vacuolar Protein Processing

In developing seeds, Gamma-VPE processes storage protein precursors into mature forms. Studies using the antibody reveal:

  • Temporal regulation of Gamma-VPE during seed maturation.

  • Colocalization with vacuolar storage proteins in protein storage vacuoles.

Comparative Analysis of Gamma-VPE in Plants

OrganismGeneFunctionPCD ContextSource
Arabidopsis thalianaAt4g32940Seed protein processing, heat shock-induced PCDVacuole rupture during stress
Citrus grandisCgVPE1Vacuole destruction in secretory cavity developmentPCD during fruit development

Challenges and Future Directions

  • Specificity: Polyclonal antibodies may cross-react with homologous VPE isoforms (e.g., Beta-VPE, Delta-VPE).

  • Quantification: ELISA protocols require optimization for low-abundance proteins .

  • Therapeutic Potential: Insights into Gamma-VPE’s role in PCD may inform strategies for crop resilience against abiotic stress.

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
At4g32940 antibody; F26P21.60 antibody; Vacuolar-processing enzyme gamma-isozyme antibody; EC 3.4.22.34 antibody; Asparaginyl endopeptidase gamma-VPE antibody; Gamma-VPE antibody
Target Names
At4g32940
Uniprot No.

Target Background

Function
This asparagine-specific endopeptidase is involved in processing vacuolar seed protein precursors into their mature forms. It likely plays a role in the post-translational proteolysis of seed storage proteins within the protein storage vacuole of developing seeds.
Gene References Into Functions
  1. The activation of Arabidopsis gamma-VPE was mediated by MPK6 and played a crucial role in heat shock-induced programmed cell death in Arabidopsis. PMID: 22497243
  2. GammaVPE is the proteinase that exhibits caspase-1 activity. PMID: 16043487
Database Links

KEGG: ath:AT4G32940

STRING: 3702.AT4G32940.1

UniGene: At.21567

Protein Families
Peptidase C13 family
Subcellular Location
Vacuole. Lytic vacuole.
Tissue Specificity
Specific to vegetative organs, especially in senescent tissues. Also expressed in seeds and root tips.

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