xlf1 Antibody

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Description

DNA Repair Mechanisms

XLF interacts with XRCC4 to stabilize DNA bridges, facilitating repair of double-strand breaks. Phosphorylation of XLF’s disordered regions modulates its DNA-binding capacity, with phospho-mimetic mutations (e.g., Asp variants) impairing DNA bridging without affecting direct DNA binding .

Cellular Sensitivity Studies

  • XLF-deficient cells exhibit hypersensitivity to DNA-damaging agents like neocarzinostatin. CRISPR/Cas9 disruption of XLF in HCT116 and CHO cells reduces DNA repair efficiency, which is partially rescued by wild-type XLF but not by phosphorylation-deficient mutants (Ala/Asp variants) .

  • In XRCC4-deficient cells, XLF knockout exacerbates genomic instability, highlighting its cooperative role with XRCC4 in NHEJ .

Clinical Relevance

Mutations in XLF are linked to severe immunodeficiency, growth retardation, and increased cancer risk, underscoring the antibody’s utility in diagnosing and studying these conditions .

Table 1: XLF Antibody Performance in Key Assays

ApplicationDilutionTarget Band (kDa)Cell Line/ModelKey ObservationSource
Western Blotting1:100039Human cell lysatesDetects endogenous XLF
Immunoprecipitation1:10039HCT116, CHO cellsCo-precipitates XRCC4 in DNA repair complexes
Functional StudiesN/AN/AXRCC4/XLF-deficient cellsRestores zeocin resistance upon complementation

Table 2: Impact of XLF Mutations on DNA Repair

Mutation TypeDNA BindingDNA BridgingRescue of Drug Resistance
Wild-TypeNormalNormalFull
Asp (Phospho-mimetic)NormalReducedPartial
Ala (Phospho-blocking)NormalReducedPartial

Data derived from .

Key Protocols and Validation

  • Western Blotting:

    1. Use 20–30 µg of whole-cell lysate.

    2. Transfer to PVDF membrane after SDS-PAGE.

    3. Incubate with XLF antibody (1:1000) overnight at 4°C .

  • Immunoprecipitation:

    • Combine 0.35 mg lysate with 1:50 antibody dilution .

    • Verify interactions with XRCC4 using secondary antibodies like VeriBlot for IP (1:5000) .

Comparative Analysis of XLF Antibodies

Antibody CloneHostApplicationsKey Research Use CaseSource
#2854 (CST)RabbitWB, IPStudying XLF-XRCC4 interactions in NHEJ
ab33499 (Abcam)RabbitWB, functional assaysAnalyzing XLF phosphorylation mutants

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
xlf1 antibody; mug104 antibody; nej1 antibody; SPCC24B10.14c antibody; Xrcc4-like factor 1 antibody; Meiotically up-regulated gene 104 protein antibody; Non-homologous end-joining protein 1 antibody
Target Names
xlf1
Uniprot No.

Target Background

Function
Plays a crucial role in non-homologous end joining (NHEJ), a key DNA repair pathway responsible for mending double-strand breaks (DSBs). It also participates in the intricate process of meiosis.
Database Links
Protein Families
XLF family
Subcellular Location
Nucleus.

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