Avidin Protein

Avidin
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Description

Introduction to Avidin Protein

Avidin is a tetrameric glycoprotein found in the egg whites of birds, reptiles, and amphibians. It binds biotin (vitamin B7) with one of the strongest non-covalent interactions in nature, characterized by a dissociation constant (KdK_d) of ~1015^{-15} M . Discovered by Esmond Emerson Snell in the 1940s during studies on biotin deficiency in chicks fed raw egg whites, avidin’s ability to sequester biotin led to its recognition as a critical tool in biochemistry . Its structural robustness and high specificity have made it indispensable in biotechnology, diagnostics, and therapeutics.

Molecular Architecture

  • Quaternary Structure: Homotetramer comprising four identical 128-amino-acid subunits, with a total molecular weight of 66–69 kDa .

  • Secondary Structure: Each subunit forms an eight-stranded antiparallel β-barrel, with biotin binding at the barrel’s interior .

  • Glycosylation: Contains ~10% carbohydrate content (mannose and N-acetylglucosamine residues), contributing to its solubility and stability .

PropertyValueSource
Molecular Weight67 kDa (tetramer)
Isoelectric Point (pI)10–10.5
Biotin Binding Sites4 per tetramer

Biotin Binding Mechanism

Avidin’s biotin-binding pocket is lined with tryptophan and lysine residues, enabling high-affinity interactions through hydrogen bonding and hydrophobic forces . Key features include:

  • Affinity: Kd1015K_d \approx 10^{-15} M, surpassing antibody-antigen interactions by 103^3–106^6-fold .

  • Irreversibility: Binding is resistant to pH extremes, organic solvents, and denaturants, though reversible with excess biotin or analogs like desthiobiotin .

Thermal and Chemical Stability

Avidin exhibits exceptional stability:

  • Thermal Resistance: Wild-type avidin retains function up to 85°C. Chimeric mutants (e.g., A/A2-B) achieve even higher stability (melting temperature Tm=118.7CT_m = 118.7^\circ C with biotin) .

  • pH Tolerance: Stable across a broad pH range (3–11) .

Thermal Stability of Avidin Variants

ProteinTmT_m (-biotin)TmT_m (+biotin)ΔTmT_m
Wild-type Avidin83.5°C117.0°C33.5°C
AVR2 (I109K mutant)97.6°C118.7°C21.1°C
Chimeric A/A2-B106.4°C125.4°C19.0°C
Data sourced from differential scanning calorimetry (DSC) studies .

Diagnostic and Research Tools

  • Assays: ELISA, Western blot, and immunohistochemistry (IHC) leverage avidin-biotin complexes for signal amplification .

  • Affinity Purification: Immobilized avidin captures biotinylated proteins, nucleic acids, or antibodies .

Therapeutic Innovations

  • Drug Delivery: Avidin-biotin systems enable targeted delivery of chemotherapeutics, radioisotopes, or gene therapies to cancer cells .

  • Cancer Therapy: Engineered avidin derivatives (e.g., neutral forms with reduced non-specific binding) improve tumor targeting .

Engineering Enhanced Avidin Variants

  • Chimeric Proteins: DNA shuffling of avidin and avidin-related protein 2 (AVR2) produced mutants like A/A2-B, which exhibit higher thermal stability and lower biotin dissociation rates .

  • Isoelectric Point Customization: Modifying avidin’s pI reduces non-specific interactions in physiological environments .

Industry Advancements

  • E-Proteins: Developed avidin conjugates (e.g., eQuant-HRP) for high-sensitivity assays and neutral variants for in vivo applications .

Comparative Analysis of Avidin Family Proteins

PropertyAvidinStreptavidinNeutrAvidinBradavidin II
OriginChicken eggStreptomycesAvidin derivativeBradyrhizobium
Molecular Weight67 kDa52.8 kDa60 kDa58.4 kDa
pI10–10.55.3–6.56.59.6
GlycosylationYesNoNoNo
ApplicationsIHC, Drug DeliveryImmunoassaysLow-background assaysAffinity purification
Adapted from PLOS ONE and PMC studies .

Future Directions

Ongoing research focuses on:

  • Gene Therapy: Using avidin to deliver CRISPR-Cas9 components .

  • Theranostics: Combining diagnostics and therapy via avidin-biotin platforms .

  • Improved Mutants: Rational design of avidin analogs with tunable biotin-release kinetics for controlled drug delivery .

Product Specs

Introduction
Avidin, a protein composed of four identical subunits (homotetramer), exhibits remarkable affinity and specificity for biotin binding. Each subunit contributes to the overall tetrameric structure, resulting in a molecular weight ranging from 66 to 69 kDa. Found in the egg whites of birds, reptiles, and amphibians, avidin originates from the oviducts of these animals. Chicken egg white contains approximately 0.05% avidin, equivalent to about 1.8 mg per egg. Notably, carbohydrates constitute 10% of avidin's molecular weight, comprising four to five mannose residues and three N-acetylglucosamine residues. Avidin displays at least three distinct oligosaccharide structural types, all sharing similarities in structure and composition. The extraordinary binding strength between avidin and biotin is reflected in its dissociation constant (KD) of approximately 10-15M, establishing it as one of the strongest non-covalent bonds known.
Description
Avidin, a glycosylated polypeptide, possesses a molecular mass of 68 kDa and comprises four subunits, each capable of binding to biotin. Its purification involves affinity chromatographic techniques, ensuring minimal contamination from other proteins or DNA. This meticulous purification process yields a highly active and pure product with exceptionally low non-specific binding (NSB).
Physical Appearance
White, lyophilized powder that has undergone sterile filtration.
Solubility
For reconstitution of lyophilized Avidin, it is recommended to use sterile 18MΩ-cm H2O. The final concentration of the solution should be within the range of 100 µg/ml to 10 mg/ml.
Stability
While lyophilized Avidin remains stable at room temperature for up to 3 weeks, it is advisable to store it in a desiccated state below -18°C. After reconstitution, Avidin should be stored at 4°C for a period of 2-7 days. For long-term storage, freezing below -18°C is recommended. To enhance stability during storage, consider adding a carrier protein like HSA or BSA (0.1%). It is essential to avoid repeated freeze-thaw cycles.
Biological Activity

The biological activity is 14.0 units per milligram of protein, where 1 unit is defined as the amount capable of binding 1 µg of biotin.

Applications

Avidin serves as a valuable tool for visualizing biotin-conjugated molecules in various applications, including ELISA, blotting techniques, and histological studies.

Synonyms
Avidin, AVD, AVID.
Source
Hen's egg white.

Product Science Overview

Structure and Binding

Avidin is composed of four identical subunits, each capable of binding to biotin (Vitamin B7 or Vitamin H) with a high degree of affinity and specificity . The dissociation constant of the avidin-biotin complex is measured to be approximately 10^-15 M, making it one of the strongest known non-covalent bonds . The tetrameric form of avidin is estimated to be 66–69 kDa in size, with about 10% of its molecular weight contributed by carbohydrate moieties .

Discovery

Avidin was first isolated from raw chicken egg white by Esmond Emerson Snell . The discovery began with the observation that chicks on a diet of raw egg white were deficient in biotin, despite the availability of the vitamin in their diet . Snell concluded that a component of the egg white was sequestering biotin, which he verified in vitro using a yeast assay . He later isolated the component responsible for biotin binding and confirmed that it was the cause of biotin deficiency or "egg white injury" .

Natural Function

The natural function of avidin in eggs is not entirely understood. However, it has been postulated that avidin is produced in the oviduct as a bacterial growth inhibitor by binding biotin, which is essential for bacterial growth . Streptavidin, a related protein with equal biotin affinity, is produced by certain strains of Streptomyces bacteria and is thought to inhibit the growth of competing bacteria, acting similarly to an antibiotic .

Applications

The high affinity of avidin for biotin has been exploited in various scientific applications since the mid-1970s . Avidin and its bacterial counterpart, streptavidin, have become standard reagents for diverse detection schemes, including histochemical applications, immunoassays, and DNA hybridization procedures . These techniques often involve applying a biotinylated probe to a sample and then detecting the bound probe with a labeled avidin or streptavidin .

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