Dengue NS1 c

Dengue Virus NS1c Recombinant
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Description

Role of the C-Terminal (c) Region in NS1

The C-terminal region of NS1 is implicated in:

  • Immune recognition: Dominant target for antibodies in secondary dengue infections .

    • DHF patients exhibit higher antibody titers against the C-terminal than DF patients .

    • Anti-C-terminal antibodies correlate with NS1 clearance but may enhance platelet opsonization .

  • Hexamer stability: Glycosylation at N-207 (C-terminal) stabilizes dimeric NS1, while N-130 stabilizes hexamers .

  • Vaccine design: C-terminal epitopes are prioritized for vaccines to minimize cross-reactivity with host proteins .

Engineered NS1 Variants (e.g., dNS1)

A truncated NS1 variant (dNS1) lacking N- and C-terminal regions has been developed to reduce pathogenicity while retaining immunogenicity :

Comparative Properties of NS1 vs. dNS1:

PropertyNS1 (Wild-Type)dNS1 (Truncated)
Receptor bindingBinds TLR4, HDLReduced TLR4 affinity
Vascular leakageHighLow
Antibody responseCross-reactiveSerotype-specific
Vaccine potentialHigh risk of ADELower ADE risk

Clinical and Diagnostic Relevance

  • NS1 as a biomarker:

    • Detectable in serum 1–7 days post-symptom onset, with levels correlating with disease severity .

    • FDA-approved NS1 antigen tests (e.g., ELISA, lateral flow) use antibodies targeting conserved regions, including the C-terminal .

  • Therapeutic targeting:

    • Anti-NS1 monoclonal antibodies against the C-terminal reduce vascular leakage in murine models .

    • dNS1 shows promise in vaccine candidates by eliciting protective antibodies without triggering severe inflammation .

Research Gaps and Future Directions

  • Mechanistic studies: How C-terminal-specific antibodies balance protective vs. pathogenic roles .

  • Variant optimization: Improving dNS1’s stability and immunogenicity for clinical trials .

  • Cross-reactivity: Engineering NS1 antigens to avoid antibody-dependent enhancement (ADE) with Zika/West Nile viruses .

Product Specs

Introduction
Dengue fever is caused by four closely related virus serotypes of the genus Flavivirus, belonging to the family Flaviviridae. These serotypes are distinct enough that infection with one does not confer immunity against the others, leading to the possibility of sequential infections with different serotypes (hyperendemicity). Research has demonstrated the effectiveness of Morpholino antisense oligos in targeting Dengue virus in both cell cultures and mice models.
Description
This recombinant protein, derived from E. coli, encompasses the immunodominant C-terminal regions of the NS1 protein from Dengue Virus Type-2.
Purity
The purity of the Dengue Protein exceeds 90%, as determined by Coomassie staining on a 10% PAGE gel.
Formulation
The Dengue protein is supplied in a buffer consisting of 20mM Tris-HCl at pH 8.0, 8M urea, and 60mM NaCl.
Applications
The optimal working concentration of this product varies depending on the specific application. It is recommended that each laboratory empirically determine the most suitable titer for their intended use.
Stability
For optimal storage, Dengue protein should be kept at a temperature below -18°C. While it can remain stable at 4°C for up to one week, it is advisable to avoid repeated freeze-thaw cycles.
Source
Escherichia Coli.
Amino Acid Sequence
LWSNGVLESE MVIPKNFAGP KSQHNNRPGY HTQTAGPWHL GKLEMDFDFC EGTTVVVTED CGNRGPSLRT TTASGKLITE WCCRSCTLPP LRYRGEDGCW YGMEIRPLKE KEENLVSSLV TAHHHHHH
Purification Method
Dengue protein is purified by proprietary chromatographic technique.

Q&A

What is the structural composition of Dengue NS1 and how is it expressed in infected cells?

NS1 is a glycoprotein (46-55 kDa) that exists in multiple conformations: as a dimer associated with the cell membrane, and as secreted oligomers primarily in hexameric form . Recent evidence suggests NS1 may also be secreted as tetramers in addition to hexamers . The protein is found both inside infected cells and on the outer phase of the plasma membrane, while also being secreted into circulation where it can reach concentrations up to 50 μg/ml during peak viremia .

NS1 levels in patient blood plasma correlate positively with disease severity markers such as thrombocytopenia, hemorrhage, and vascular leakage . The protein's elusive nature stems from its complex roles in both viral life cycle maintenance and pathogenesis mechanisms.

What specific roles does the C-terminal region play in NS1's pathogenic functions?

The C-terminal region of NS1 contains epitopes that mediate cross-reactivity with host platelets. Studies comparing full-length NS1 with C-terminal deleted variants (lacking amino acids 271-352) demonstrate that antibodies against full-length NS1 bind platelets with higher affinity than antibodies against the deletion variant . This interaction leads to inhibition of platelet aggregation involving integrin αIIbβ3 inactivation, suggesting a mechanism for dengue-associated bleeding tendencies .

In animal models, mice hyperimmunized with full-length NS1 exhibited longer bleeding times compared to control mice, while those immunized with C-terminal deleted NS1 showed normal bleeding parameters . This evidence suggests the C-terminal region is critical for NS1's interaction with coagulation processes and platelet function.

What techniques are effective for studying C-terminal deletion variants of NS1?

Research into C-terminal deletion variants employs several complementary approaches:

  • Bioinformatic analysis and molecular modeling: Using computational tools to identify conserved regions and predict structural changes when C-terminal sequences are deleted .

  • Molecular docking studies: Evaluating receptor-binding capabilities of full-length NS1 versus deletion variants (e.g., dNS1) with potential receptors like TLR4 .

  • Recombinant protein expression: Cloning and expressing specific regions of NS1 (such as amino acids 153-312) followed by purification and refolding procedures to obtain functional protein variants .

  • Immunization studies: Comparing antibody production and specificity when animals are immunized with full-length NS1 versus C-terminal deleted variants .

  • Platelet function assays: Measuring bleeding time, platelet aggregation, and antibody binding to platelets to assess the impact of different NS1 variants on hemostasis .

Research has shown that despite C-terminal deletions, the core immunogenic epitopes may remain functional; for example, dNS1 (amino acids 153-312) maintains TLR4 receptor binding capability, suggesting N and C-terminal sequences are not critical for this particular interaction .

How can researchers effectively detect and analyze NS1-antibody complexes in clinical samples?

Detecting NS1-antibody complexes requires sophisticated methodological approaches:

Research has demonstrated that NS1 antigen-antibody complexes are detectable during the febrile phase but decrease by the recovery phase, suggesting antibody-mediated clearance of the viral protein .

How does the C-terminal region of NS1 contribute to thrombocytopenia in dengue infection?

The C-terminal region plays a crucial role in platelet interactions and thrombocytopenia through several mechanisms:

  • Direct platelet activation: NS1 can activate platelets via TLR4, resulting in aggregation, increased phagocytosis by macrophages, and augmented adhesion to endothelial cells .

  • Cross-reactive antibody production: Antibodies against the C-terminal region of NS1 cross-react with platelets, potentially leading to immune-mediated destruction .

  • Integrin inactivation: Anti-NS1 antibodies targeting the C-terminal region can inactivate integrin αIIbβ3, inhibiting platelet aggregation and potentially contributing to bleeding complications .

  • Platelet opsonization: NS1 antibodies may opsonize platelets, enhancing their clearance from circulation .

Experimental evidence shows that passively administered anti-full-length NS1 antibodies (but not anti-ΔC NS1 antibodies) cause transient platelet loss in circulation, supporting the role of C-terminal epitopes in platelet-antibody interactions .

How do antibody responses to NS1 differ between mild and severe dengue infections?

Antibody responses to NS1 show distinct patterns in mild versus severe dengue infections:

  • Antibody titer differences: NS1 antibody titers are significantly higher in patients with Dengue Hemorrhagic Fever (DHF) compared to those with mild Dengue Fever (DF) during the critical phase of illness, for both DENV1 and DENV2 serotypes .

  • Epitope targeting variation: The antibody repertoire differs between mild and severe cases, with antibodies from DHF and DF patients targeting distinct regions of the NS1 protein .

  • Temporal dynamics: Secondary infection patients show higher anti-NS1 antibody titers earlier in disease progression compared to primary infection patients, though this trend may not reach statistical significance in all cohorts (3.758 vs 2.751, P = 0.1028) .

  • Similarity to post-infection patterns: Healthy individuals with past non-severe dengue infection exhibit antibody repertoires similar to those with mild acute infection (DF), suggesting the pattern of NS1 epitope targeting may be established early and remain consistent .

These findings suggest that not just the quantity but the quality of anti-NS1 antibodies—specifically which epitopes they target—may influence disease outcomes .

What is the value of C-terminal deleted NS1 variants for vaccine development?

C-terminal deleted NS1 variants show promise for vaccine development for several reasons:

  • Reduced pathogenic potential: Immunization with C-terminal deleted NS1 (ΔC NS1) does not induce the bleeding tendencies observed with full-length NS1, making it potentially safer for vaccine use .

  • Maintained immunogenicity: Despite N and C-terminal deletions, variants such as dNS1 (amino acids 153-312) retain their immunogenic potential, eliciting antibodies that recognize both the variant and full-length NS1 .

  • Receptor binding capacity: dNS1 maintains the ability to bind to TLR4 receptors, suggesting it can still stimulate appropriate immune responses .

  • Cross-reactivity reduction: By removing regions involved in cross-reactivity with host tissues, C-terminal deleted variants may reduce the risk of autoimmune complications while preserving protective immunity .

  • Sequence conservation: NS1 has high sequence conservation across dengue serotypes, making it valuable for broad protection, and the deletion variants appear to maintain the conserved immunogenic regions .

The evidence supports using C-terminal deleted NS1 variants in future vaccine formulations as a potentially safer alternative to full-length NS1, while still providing protective immunity .

How should researchers interpret contradictory data regarding NS1 oligomerization states?

When facing contradictory data on NS1 oligomerization:

  • Expression system considerations: Recent evidence shows that recombinant NS1 expressed in human embryonic kidney cells can form tetramers in addition to the well-documented hexamers . Researchers should consider how expression systems might influence oligomeric state.

  • Native versus recombinant protein differences: A recent study indicates that secreted NS1 from actual DENV infection is predominantly dimeric rather than hexameric , contrasting with earlier findings. This highlights the importance of studying native protein from infection rather than relying solely on recombinant systems.

  • Temporal dynamics: The oligomeric state of NS1 may change during infection progression or in different microenvironments. Serial sampling and preservation of native conditions during isolation are critical.

  • Interaction-induced conformational changes: NS1 interaction with host factors like HDL can alter its conformation and potentially its oligomeric state. Between 2-4 NS1 dimers have been visualized bound to a single HDL molecule , suggesting dynamic structural transitions.

  • Methodological artifacts: Different detection and purification methods may artificially alter NS1's oligomeric state. Researchers should employ complementary techniques and minimize sample manipulation.

When designing experiments, researchers should clearly document the source and preparation method of NS1 (native vs. recombinant, expression system, purification approach) and consider how these factors might influence oligomerization results.

What approaches are most effective for investigating NS1-HDL interactions and their pathogenic implications?

For studying NS1-HDL interactions:

  • Cryo-electron microscopy: This technique has successfully visualized NS1-HDL complexes, revealing that 2-4 NS1 dimers can bind to a single HDL molecule .

  • Lipoprotein isolation from patient samples: Collecting serum from hospitalized dengue patients and isolating lipoprotein fractions can identify NS1-HDL complexes in clinical settings .

  • Functional assays with isolated complexes: Testing NS1-bound HDL versus free HDL on cultured human primary macrophage cells has revealed differential inflammatory responses, providing insight into functional consequences .

  • SRB1 receptor studies: Since NS1 shares similarities with HDL in lipid composition and receptor usage (particularly SRB1), receptor binding assays and competition studies can elucidate interaction mechanisms .

  • Wing domain mapping: Recent work has mapped the wing domain of NS1 as the cell binding domain, which may be involved in HDL interactions. Domain-specific mutation or deletion studies can clarify structural requirements .

These approaches should be integrated with clinical data on lipid profile changes during dengue infection to establish connections between NS1-HDL interactions and disease manifestations.

Product Science Overview

Introduction

Dengue virus (DENV) is a significant global health concern, causing millions of infections annually. The virus is transmitted by Aedes mosquitoes and can lead to severe diseases such as dengue hemorrhagic fever (DHF) and dengue shock syndrome (DSS). Among the various proteins encoded by the dengue virus, nonstructural protein 1 (NS1) plays a crucial role in the virus’s life cycle and pathogenesis.

Structure and Function of NS1

NS1 is a 48-kDa glycoprotein that is highly conserved among all flaviviruses . It is essential for viral replication and is involved in various functions within infected cells, on the cell surface, and in its secreted form. NS1 is initially expressed as a monomer in infected cells and later forms dimers and hexamers . The protein is known to interact with other nonstructural proteins, such as NS4A and NS4B, to facilitate viral replication .

Immunogenicity and Pathogenicity

NS1 is highly immunogenic and induces strong antibody responses in infected individuals . These antibodies can be both protective and pathogenic. On the one hand, NS1-specific antibodies can mediate antibody-dependent cellular cytotoxicity (ADCC) and activate natural killer (NK) cells, contributing to the immune response against the virus . On the other hand, NS1 can induce endothelial hyperpermeability and vascular leakage, leading to severe disease manifestations .

Recombinant NS1c

Recombinant NS1c refers to the C-terminal region of the NS1 protein produced using recombinant DNA technology. This recombinant protein is used in various research and diagnostic applications. For instance, recombinant NS1c is employed in enzyme-linked immunosorbent assays (ELISAs) to detect NS1-specific antibodies in patient sera . Additionally, it is used in vaccine development to elicit protective immune responses against dengue virus .

Applications in Research and Medicine

The use of recombinant NS1c has significantly advanced our understanding of dengue virus pathogenesis and immune responses. Studies have shown that NS1-specific antibodies can cross-react with different dengue virus serotypes, providing insights into the mechanisms of immune protection and enhancement . Furthermore, recombinant NS1c is being explored as a potential vaccine candidate to induce protective immunity without causing adverse effects associated with natural infection .

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