FAM107B Human

Family with Sequence Similarity 107, Member B Human Recombinant
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Description

Gene Structure and Evolutionary Conservation

FAM107B (Family With Sequence Similarity 107 Member B) is a human gene located on chromosome 10p13, encoding a 18 kDa nuclear protein . Key structural features include:

AttributeDetails
Chromosomal Location10p13 (minus strand)
mRNA Length3,785 base pairs
Exons5 exons, with 27 spliced variants
Protein Isoforms17 isoforms identified, including mitochondrial-targeted variants
Sequence Similarity65% N-terminal DUF1151 domain with FAM107A; 98% homology with rodent orthologs

FAM107B belongs to the FAM107 family, which includes FAM107A (TU3A/DRR1). Both share conserved DUF1151 domains but differ in C-terminal coiled-coil regions .

Protein Characteristics and Functional Domains

FAM107B is an 18 kDa protein with distinct structural and functional properties:

FeatureDescription
Subcellular LocalizationNuclear
Key DomainsN-terminal DUF1151 (unknown function); C-terminal coiled-coil (transcriptional regulation)
Interacting ProteinsTada3α (transcriptional adaptor) ; S100A4 (metastasis-associated protein)

Comparison with FAM107A

AspectFAM107BFAM107A
Primary RoleTumor suppression Dual roles (TSG/oncogene in gliomas)
Cytoskeletal InteractionNone reported Actin/microtubule crosslinking
Heat Shock ResponsivenessInduced by hyperthermia Limited evidence

Functional Roles in Cellular Biology

FAM107B exhibits multifaceted roles in cellular homeostasis and cancer biology:

Tumor Suppression

  • Downregulation in Cancers: Reduced expression in gastric, colorectal, lung, and breast cancers .

  • Growth Inhibition: Forced expression suppresses proliferation and migration in gastric cancer cells (e.g., MGC803) .

  • Heat Shock Induction: Promoter contains heat shock transcription factor (HSF) binding sites, enabling stress-responsive upregulation .

Transcriptional Regulation

  • HAT Complex Modulation: Interacts with Tada3α, a core component of histone acetyltransferase (HAT) complexes .

  • Oncogene Suppression: Inhibits S100A4-mediated pathways, reducing tumor invasion .

Stress Response

  • Heat Shock Protein (HSP) Analog: Shares functional similarity with HSPs but lacks oncogenic properties .

Clinical Implications in Cancer

FAM107B’s dysregulation is linked to diverse malignancies:

Cancer TypeExpression StatusFunctional Impact
GastricDownregulated Reduced proliferation/migration inhibition
ColorectalLoss in tumor cells Diagnostic biomarker potential
Basal-like BreastC-terminal mutations in metastases Unknown prognostic significance

Mechanistic Insights

  • S100A4 Interaction: FAM107B mediates S100A4’s effects on gastric cancer cell migration .

  • Epigenetic Silencing: Promoter methylation observed in aflatoxin B1-exposed cells .

Research Findings and Experimental Models

Key studies highlight FAM107B’s regulatory networks:

Study FocusMethodologyOutcome
S100A4 RegulationsiRNA knockdown in MGC803 cells Increased proliferation/migration
Estradiol EffectsHormonal treatment in rodent models Dose-dependent mRNA downregulation
Aflatoxin B1 ExposureMethylation analysis Promoter hypermethylation linked to silencing

Future Directions and Unresolved Questions

  1. Mechanistic Elucidation:

    • Role of DUF1151 in transcriptional regulation.

    • Therapeutic potential in restoring FAM107B expression in cancers.

  2. Diagnostic Utility:

    • Validation as a biomarker for gastrointestinal cancers.

  3. Stress Response Dynamics:

    • Synergy between heat shock induction and chemotherapeutic efficacy.

Product Specs

Introduction
Belonging to the FAM107 family, Family with Sequence Similarity 107, Member B (FAM107B) is found in most human tissues and is present throughout human development.
Description
FAM107B Human Recombinant protein is produced in E. coli. It is a single, non-glycosylated polypeptide chain containing 154 amino acids (residues 1-131) with a molecular weight of 17.9 kDa. A 23 amino acid His-tag is fused to the N-terminus. The protein is purified using proprietary chromatographic techniques.
Physical Appearance
A clear, colorless solution that is sterile filtered.
Formulation
The FAM107B solution has a concentration of 1mg/ml and contains 20mM Tris-HCl buffer with a pH of 8.0, 0.15M NaCl, 20% glycerol, and 1mM DTT.
Stability
For short-term storage (2-4 weeks), the product can be stored at 4°C. For extended storage, it is recommended to freeze the product at -20°C. The addition of a carrier protein (0.1% HSA or BSA) is advised for long-term storage. Repeated freezing and thawing should be avoided.
Purity
Purity is determined to be greater than 95% by SDS-PAGE analysis.
Synonyms
FAM107B protein, FLJ45505, MGC11034, Protein FAM107B, Family with Sequence Similarity 107, Member B, FAM107B, C10orf45.
Source
Escherichia Coli.
Amino Acid Sequence
MGSSHHHHHH SSGLVPRGSH MGSMAEPDYI EDDNPELIRP QKLINPVKTS RNHQDLHREL LMNQKRGLAP QNKPELQKVM EKRKRDQVIK QKEEEAQKKK SDLEIELLKR QQKLEQLELE KQKLQEEQEN APEFVKVKGN LRRTGQEVAQ AQES.

Product Science Overview

Gene and Protein Structure

FAM107B is located on chromosome 10 and is also known by other names such as C10orf45, FLJ45505, and HITS . The gene encodes a protein that consists of 154 amino acids and has a molecular mass of approximately 17.9 kDa . The recombinant form of FAM107B is produced in Escherichia coli (E. coli) and is a single, non-glycosylated polypeptide chain . It is often fused to a 23 amino acid His-tag at the N-terminus to facilitate purification through chromatographic techniques .

Biological Function

FAM107B is predicted to play a role in the sensory perception of sound . It is involved in various cellular processes, including cell proliferation, immune response, and protein ubiquitination . The protein is expressed in multiple tissues, including lymphoid tissue, bone marrow, testis, skeletal muscle, and various immune cells .

Disease Associations

Mutations or dysregulation of FAM107B have been linked to several diseases. Notably, it is associated with tibial neuropathy and cataract 13 with adult I phenotype . These associations highlight the potential clinical significance of FAM107B and its importance in maintaining normal physiological functions.

Research and Applications

The recombinant form of FAM107B is valuable in research settings. It allows scientists to study the protein’s function, interactions, and role in disease mechanisms. The availability of recombinant FAM107B facilitates various experimental approaches, including structural analysis, functional assays, and therapeutic research.

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