Length: 182 amino acids (502–683 residues of the 683-residue full-length TGFBI).
Molecular Weight: 19.9 kDa (non-glycosylated; SDS-PAGE migration may appear higher due to charge effects).
Key Domains:
TGFBI mutations are linked to autosomal dominant corneal dystrophies (CDs), including lattice corneal dystrophy (LCD) and granular corneal dystrophy (GCD). The 182 a.a. fragment is critical for studying mutant protein aggregation.
Amyloid Formation: R124C mutants promote amyloid-β (Aβ) aggregation in vitro, exacerbated by osmolytes like TMAO .
Therapeutic Target: TMAO suppresses R124C-induced aggregation, suggesting potential for chemical interventions .
TGFBI influences pancreatic islet function and glucose homeostasis:
TGFBI Knockout (KO) Mice:
TGFBI Overexpression:
Model | Outcome |
---|---|
TGFBI KO | Increased diabetes susceptibility (STZ-induced) . |
TGFBI Transgenic | Improved glucose tolerance and islet regeneration . |
TGFBI is implicated in cancer through epigenetic silencing:
TGFBI Human, 182 a.a. is a recombinant protein fragment containing amino acids 502-683 of the full-length human TGFBI (Transforming growth factor-beta-induced protein ig-h3). While the complete TGFBI protein consists of 683 amino acids with multiple functional domains, this 182 a.a. fragment represents the C-terminal portion with a molecular mass of approximately 19.9 kDa . This recombinant version is produced in E. coli as a single, non-glycosylated polypeptide, which differs from the naturally occurring full-length TGFBI that undergoes post-translational modifications in mammalian cells . The 182 a.a. fragment is particularly useful for studying specific C-terminal interactions without interference from other domains present in the complete protein.
The 182 a.a. fragment of TGFBI (amino acids 502-683) contains significant functional domains including part of the fourth FAS1 domain and the C-terminal region. Based on sequence analysis and functional studies, this fragment likely contains:
Portions of the fourth fasciclin-like domain which mediates interactions with integrins, particularly α3β1, αVβ3 and αVβ5
The C-terminal region which may contain the RGD motif that facilitates binding to various integrins
Structural elements that contribute to extracellular matrix interactions
The amino acid sequence provided (MGTVMDVLKG DNRFSMLVAA IQSAGLTETL NREGVYTVFA PTNEAFRALP PRERSRLLGD AKELANILKY HIGDEILVSG GIGALVRLKS LQGDKLEVSL KNN) represents part of this fragment and contains regions that contribute to TGFBI's ability to interact with cellular components and the extracellular matrix .
For optimal stability of TGFBI Human, 182 a.a., researchers should implement the following evidence-based protocols:
Short-term storage (2-4 weeks): Store at 4°C in the original formulation (20mM Tris-HCl pH-8, 1mM EDTA, 0.1mM PMSF and 20% glycerol)
Long-term storage: Store at -20°C with the addition of a carrier protein (0.1% HSA or BSA) to prevent protein adsorption to storage vessel surfaces and maintain stability
Avoid repeated freeze-thaw cycles: Aliquot the protein before freezing to minimize degradation from repeated temperature changes
Working solution preparation: When preparing working dilutions, use buffers that maintain a pH between 7.5-8.5 to preserve protein structure and function
Handling precautions: Use sterile techniques and non-metallic utensils when aliquoting to prevent contamination and potential metal-induced oxidation
These conditions have been experimentally determined to maximize protein stability while preserving functional domains critical for experimental applications.
To effectively study TGFBI-integrin interactions using the 182 a.a. fragment, researchers should consider these methodological approaches:
Solid-phase binding assays:
Immobilize purified integrins (particularly α3β1, αVβ3, and αVβ5) on microplates
Add varying concentrations of labeled TGFBI 182 a.a.
Quantify binding through ELISA-based detection systems
Include appropriate controls with known integrin ligands and blocking antibodies
Cell adhesion assays:
Coat cell culture surfaces with TGFBI 182 a.a. at 2-10 μg/mL
Evaluate adhesion of cells expressing different integrin subtypes
Employ function-blocking antibodies against specific integrins to confirm interaction specificity
Compare results with full-length TGFBI to identify domain-specific effects
Surface Plasmon Resonance (SPR):
Immobilize TGFBI 182 a.a. on sensor chips
Flow purified integrins at various concentrations
Determine binding kinetics (kon, koff) and equilibrium constants (KD)
Compare with known integrin binding domains
Co-immunoprecipitation assays:
Use anti-TGFBI antibodies to pull down protein complexes from cells treated with TGFBI 182 a.a.
Identify integrin associations through Western blotting
Validate with reciprocal co-IP using anti-integrin antibodies
This multi-faceted approach provides comprehensive data on binding specificity, affinity, and functional relevance of the TGFBI 182 a.a. interactions with cellular integrin receptors .
TGFBI modulates the AKT/mTORC1 signaling pathway through specific molecular interactions that can be investigated using targeted experimental approaches. Based on phosphoprotein array analyses, TGFBI stimulation affects multiple components in this pathway:
Key molecular targets affected by TGFBI:
Recommended experimental approaches:
Phosphorylation kinetics assay: Treat cells with TGFBI 182 a.a. (10-50 μg/mL) for various time points (5 min to 24 h) and analyze phosphorylation patterns by Western blotting
Chemical inhibitor studies: Pre-treat cells with AKT inhibitors (MK-2206, 0.5-10 μM) prior to TGFBI stimulation to confirm pathway specificity
siRNA knockdown validation: Selectively downregulate AKT1S1, RPS6, or EIF4EBP1 using targeted siRNAs to establish their necessity in TGFBI-mediated effects
Proximity ligation assays: Detect in situ protein-protein interactions between TGFBI, integrins, and downstream signaling molecules
Data interpretation framework:
Compare signaling responses between full-length TGFBI and the 182 a.a. fragment
Analyze cell type-specific responses (particularly in islet cells vs. cancer cells)
Correlate signaling activation with functional outcomes (cell survival, proliferation, etc.)
This methodological approach provides a comprehensive understanding of how TGFBI 182 a.a. engages and modulates the AKT/mTORC1 pathway, which appears critical for its effects on cell survival and function .
Based on genetic evidence linking TGFBI to diabetes risk, several experimental models can effectively investigate its mechanistic role, with specific protocols for utilizing the 182 a.a. fragment:
Pancreatic islet models:
Ex vivo islet culture: Isolate pancreatic islets from wild-type and TGFBI KO mice; treat with TGFBI 182 a.a. (10-50 μg/mL) in serum-free conditions
Assessment metrics: Measure islet survival (using TUNEL assay), insulin secretion (glucose-stimulated insulin secretion assay), and AKT/mTORC1 pathway activation
Stress challenges: Expose islets to inflammatory cytokines (IL-1β, TNF-α, IFN-γ) or glucolipotoxicity with/without TGFBI 182 a.a. supplementation
In vivo models:
STZ-induced diabetes: Administer multiple low-dose streptozotocin (40 mg/kg for 5 consecutive days) to wild-type mice with concurrent TGFBI 182 a.a. treatment
Islet transplantation studies: Transplant a suboptimal mass of islets treated ex vivo with TGFBI 182 a.a. into diabetic recipients
Monitoring parameters: Blood glucose, glucose tolerance tests, insulin sensitivity, and histological assessment of β-cell mass/proliferation
Molecular investigations:
Domain-specific functions: Compare TGFBI 182 a.a. effects with full-length protein to identify functional domains critical for islet preservation
Receptor identification: Use blocking antibodies against various integrins to determine which mediates TGFBI's effects on islet cells
Signaling cascade analysis: Focus on AKT1S1, RPS6, and EIF4EBP1 phosphorylation status, as these have been implicated in TGFBI signaling in islets
Translational relevance:
Correlate experimental findings with human genetic data linking TGFBI SNPs to diabetes risk
Develop potential therapeutic strategies based on TGFBI 182 a.a. administration or enhancement of endogenous TGFBI signaling
These methodologies enable comprehensive investigation of TGFBI's role in islet biology and diabetes pathophysiology, with particular focus on whether the 182 a.a. fragment retains the protective functions observed with the full-length protein .
To address the paradoxical roles of TGFBI in cancer biology, researchers should implement a systematic experimental approach using the 182 a.a. fragment:
Context-dependent signaling analysis:
Compare TGFBI 182 a.a. effects across multiple cancer cell lines (ovarian, pancreatic, etc.)
Measure proliferation, migration, invasion, and apoptosis responses using standardized assays
Analyze dose-dependent responses (1-100 μg/mL) to identify potential biphasic effects
Map activated signaling networks using phosphoproteomic approaches in each cellular context
Proteolytic processing investigation:
Determine if the 182 a.a. fragment undergoes further proteolytic processing in the tumor microenvironment
Compare intact fragment versus potential cleavage products generated by tumor-associated proteases
Assess whether proteolytic processing converts TGFBI from tumor-promoting to tumor-suppressive functions
Integrin receptor profiling:
Characterize integrin expression patterns across cancer cell lines using flow cytometry
Correlate integrin expression profiles with TGFBI 182 a.a. response patterns
Use integrin-blocking antibodies to determine which specific integrins mediate tumor-promoting versus tumor-suppressive effects
Experimental design matrix:
Experimental Condition | High Integrin-Expressing Cells | Low Integrin-Expressing Cells |
---|---|---|
TGFBI 182 a.a. (10 μg/mL) | Measure: proliferation, migration, signaling | Measure: same parameters |
TGFBI 182 a.a. + integrin blockers | Determine integrin dependency | Confirm specificity |
TGFBI 182 a.a. + protease inhibitors | Assess role of proteolytic processing | Compare with control |
TGFBI 182 a.a. in hypoxic conditions | Mimic tumor microenvironment | Evaluate context dependency |
Clinical correlation:
Analyze TGFBI expression in patient tumor samples in relation to clinical outcomes
Correlate findings with experimental data using the 182 a.a. fragment to identify translational relevance
This methodological framework enables systematic investigation of TGFBI's dual functions in cancer, helping researchers decipher when and how it promotes or suppresses tumor progression .
To investigate the role of TGFBI-β3 integrin interactions in ovarian cancer therapy resistance, researchers should implement the following methodological approaches:
Cell Line Models and Resistance Profiling:
Establish paired topotecan-sensitive and resistant ovarian cancer cell lines
Quantify TGFBI and β3 integrin expression using qPCR and Western blot
Compare expression levels between sensitive and resistant lines
Perform immunofluorescence co-localization studies to visualize TGFBI-β3 integrin interactions
Functional Modulation Studies:
TGFBI knockdown/overexpression: Generate stable cell lines with modulated TGFBI expression using lentiviral vectors
β3 integrin blockade: Use function-blocking antibodies (LM609) or small molecule inhibitors (cilengitide)
Recombinant protein treatment: Treat cells with TGFBI 182 a.a. (5-50 μg/mL) with/without β3 integrin blockade
Measure outcomes: Assess chemosensitivity using dose-response curves (IC50 determination), apoptosis assays, and cell cycle analysis
Mechanistic Pathway Analysis:
Perform phosphoproteomic analysis following TGFBI 182 a.a. treatment focusing on:
FAK/Src activation status
AKT/mTOR pathway components
DNA damage response proteins
Use pathway inhibitors to validate key nodes in resistance signaling
Employ chromatin immunoprecipitation to identify transcriptional changes mediated by TGFBI-β3 integrin signaling
Tumor Microenvironment Considerations:
Co-culture resistant cancer cells with stromal components
Analyze TGFBI production by cancer-associated fibroblasts
Evaluate the impact of extracellular matrix proteins on TGFBI-mediated resistance
Use 3D spheroid models to better approximate in vivo conditions
Translational Validation:
Analyze TGFBI and β3 integrin expression in patient samples before and after therapy
Correlate expression with treatment response and progression-free survival
Develop predictive models based on TGFBI/β3 integrin expression patterns
These methodologies provide a comprehensive framework for investigating how TGFBI 182.a.a interactions with β3 integrin contribute to chemotherapy resistance in ovarian cancer, potentially identifying novel therapeutic vulnerabilities .
For effective detection of TGFBI mutations in both research and clinical contexts, several validated methodologies can be employed:
Real-Time PCR with Melting Curve Analysis:
Next-Generation Sequencing (NGS) Approaches:
Panel design: Include full TGFBI coding regions, focusing on exons 4 and 12 where mutations commonly occur
Library preparation: Use amplicon-based or hybrid capture methods
Analysis pipeline: Employ specialized bioinformatic tools for variant calling
Validation: Confirm novel variants with Sanger sequencing
Digital Droplet PCR for Low-Frequency Mutation Detection:
Partition DNA samples into thousands of droplets
Perform PCR amplification in each droplet
Quantify rare mutations with high sensitivity (0.1%)
Particularly useful for detecting mosaic mutations
Application to 182 a.a. Fragment Studies:
Design primers to specifically amplify the region corresponding to the 182 a.a. fragment (amino acids 502-683)
Create a mutation panel focused on C-terminal mutations affecting protein function
Correlate genotypic findings with functional effects using recombinant mutant versions of the 182 a.a. fragment
Methodological Workflow for Comprehensive Analysis:
Step | Technique | Purpose | Turnaround Time |
---|---|---|---|
1 | Real-time PCR/Melting Curve | Rapid screening of common mutations | 1-2 hours |
2 | Sanger Sequencing | Confirmation of mutations identified | 1-2 days |
3 | NGS Panel | Comprehensive mutation profiling | 3-7 days |
4 | Functional Validation | Testing effect of mutations using recombinant proteins | 1-2 weeks |
This comprehensive approach ensures both rapid detection of common mutations and thorough characterization of novel variants, with direct applications to research using the TGFBI 182 a.a. fragment .
To systematically differentiate between the functions of the 182 a.a. fragment and full-length TGFBI protein, researchers should implement the following comparative methodological approaches:
Domain-Specific Functional Assays:
Binding studies: Compare ECM component binding profiles of both proteins using solid-phase binding assays
Integrin interaction analysis: Conduct parallel receptor binding assays to identify differences in integrin recognition patterns
Structural studies: Employ circular dichroism spectroscopy to compare secondary/tertiary structural elements
Comparative Signaling Analysis:
Treat cells with equimolar concentrations of 182 a.a. fragment versus full-length TGFBI
Perform time-course Western blotting for phosphorylation of key signaling molecules:
AKT and AKT1S1
RPS6 and EIF4EBP1
FAK and downstream effectors
Use phosphoproteomic arrays to identify unique signaling signatures
Cell-Type Specific Response Mapping:
Test both proteins across multiple cell types (islets, epithelial cells, fibroblasts)
Measure key functional outcomes (survival, proliferation, migration)
Construct response heat maps to visualize differential effects
Competitive Inhibition Experiments:
Pre-treat cells with one form before adding the other
Determine if the 182 a.a. fragment can compete with full-length TGFBI for binding sites
Identify potential antagonistic or synergistic relationships
Structural Analysis Protocol:
Technique | Application | Key Information Obtained |
---|---|---|
Limited proteolysis | Both proteins exposed to controlled proteolytic digestion | Differences in accessible cleavage sites |
Surface plasmon resonance | Binding kinetics analysis | Differential association/dissociation rates with partners |
Intracellular trafficking | Fluorescently labeled proteins added to cells | Differences in cellular uptake and localization |
Molecular modeling | In silico structural analysis | Prediction of exposed binding surfaces unique to each form |
Genetic Complementation Studies:
Introduce either the 182 a.a. fragment or full-length TGFBI into TGFBI-knockout cells
Determine which functions can be rescued by the fragment versus the complete protein
Analyze phenotypic outcomes in detail
This systematic approach enables researchers to create comprehensive functional maps distinguishing the roles of the truncated 182 a.a. fragment from the complete TGFBI protein, critical for understanding domain-specific functions and potential therapeutic applications .
When designing experiments to evaluate TGFBI 182 a.a. as a potential therapeutic agent for diabetes, researchers should implement these methodologically rigorous approaches:
Preclinical Model Selection:
Spontaneous diabetes models: NOD mice (T1D), db/db or ob/ob mice (T2D)
Induced diabetes models: Multiple low-dose STZ (40 mg/kg for 5 days) for T1D-like condition; high-fat diet with STZ for T2D-like condition
Humanized models: Immunodeficient mice engrafted with human immune cells and islets
Critical controls: Include TGFBI knockout mice as negative controls and TGFBI transgenic mice as positive controls
Therapeutic Administration Protocols:
Preventive regimen: Begin TGFBI 182 a.a. administration before diabetes onset
Treatment regimen: Initiate after diabetes development
Dosing optimization: Test multiple doses (0.1-10 mg/kg) and schedules (daily vs. intermittent)
Administration routes: Compare intraperitoneal, subcutaneous, and intravenous delivery
Pharmacokinetics: Determine half-life and tissue distribution using labeled TGFBI 182 a.a.
Efficacy Assessment Metrics:
Glycemic control: Monitor fasting glucose, HbA1c, glucose tolerance
Insulin secretion: Perform in vivo glucose-stimulated insulin secretion tests
β-cell mass: Quantify through histomorphometry and markers of proliferation
Islet inflammation: Assess immune infiltration and inflammatory cytokine profiles
Signaling activation: Analyze AKT/mTORC1 pathway activation in pancreatic tissue
Mechanistic Investigation Design:
Research Question | Experimental Approach | Outcome Measures |
---|---|---|
Is 182 a.a. fragment sufficient for islet protection? | Compare 182 a.a. vs. full-length TGFBI | β-cell survival, insulin secretion |
Which integrins mediate protective effects? | Combine TGFBI with integrin-blocking antibodies | Signaling pathway activation |
Does TGFBI affect immune cell function? | Treat diabetogenic T cells with TGFBI 182 a.a. | Proliferation, cytokine production |
Can TGFBI enhance islet transplantation? | Pre-treat donor islets with TGFBI before transplant | Graft survival, function |
Translational Considerations:
Safety assessment: Monitor for potential off-target effects, particularly in cancer models
Biomarker development: Identify markers that predict response to TGFBI therapy
Combination approaches: Test TGFBI with established diabetes medications
Delivery optimization: Develop sustained release formulations or targeted delivery systems
This comprehensive experimental framework enables rigorous evaluation of TGFBI 182 a.a. as a potential diabetes therapeutic while addressing key mechanistic questions about its mode of action and optimal clinical application .
To thoroughly investigate the immunomodulatory properties of TGFBI 182 a.a. in autoimmune contexts, researchers should implement this comprehensive methodological framework:
Immune Cell Response Characterization:
T cell studies: Treat isolated CD4+ and CD8+ T cells with TGFBI 182 a.a. (1-50 μg/mL)
Measure proliferation (CFSE dilution)
Assess cytokine production profiles (Th1/Th2/Th17/Treg polarization)
Analyze activation markers (CD25, CD69, CD44)
Dendritic cell modulation: Evaluate effects on maturation and antigen presentation
Monitor surface markers (MHC-II, CD80/86, CD40)
Assess cytokine production (IL-12, IL-10, TGF-β)
Macrophage polarization: Determine M1/M2 balance after TGFBI treatment
Analyze marker expression (CD86 vs CD206)
Measure inflammatory cytokine production
Integrin-Dependent Mechanisms:
Perform comprehensive integrin expression profiling on immune cell subsets
Use blocking antibodies against candidate integrins (α3β1, αVβ3, αVβ5)
Conduct knockdown studies to confirm integrin dependency
Correlate integrin expression with TGFBI responsiveness across immune cell types
In Vivo Autoimmune Models:
Type 1 diabetes: NOD mice or multiple low-dose STZ model
Multiple sclerosis: Experimental autoimmune encephalomyelitis (EAE)
Rheumatoid arthritis: Collagen-induced arthritis model
Treatment protocols:
Preventive: Begin before disease onset
Therapeutic: Initiate after disease establishment
Local vs. systemic administration comparison
Mechanistic Signaling Analysis:
Focus on pathways known to regulate immune responses:
NF-κB activation status
STAT signaling (particularly STAT3/STAT5)
AKT/mTOR pathway in relation to T cell metabolism
Use pathway inhibitors to validate key nodes
Perform transcriptional profiling to identify global effects on immune response genes
Experimental Decision Tree:
Initial Observation | Follow-up Studies | Final Assessment |
---|---|---|
Decreased T cell proliferation | Test antigen-specific vs. polyclonal responses | Determine mechanism of suppression |
Altered cytokine profiles | Evaluate epigenetic modifications at cytokine loci | Map transcriptional regulation pathways |
Enhanced Treg induction | Assess stability and suppressive function | Determine therapeutic potential |
Reduced autoimmune symptoms | Analyze tissue-specific immune infiltration | Evaluate long-term disease modification |
Translational Research Considerations:
Compare findings with human autoimmune disease samples
Develop biomarkers to identify TGFBI-responsive patient subsets
Assess combination approaches with established immunomodulatory agents
Address potential adverse effects on protective immunity
This systematic approach enables comprehensive characterization of TGFBI 182 a.a.'s immunomodulatory functions while establishing mechanistic insights and therapeutic potential for autoimmune diseases .
Researchers working with TGFBI 182 a.a. frequently encounter several technical challenges that can be systematically addressed through optimized methodological approaches:
Protein Stability and Aggregation Issues:
Challenge: TGFBI 182 a.a. may form aggregates during storage or experimental handling
Solutions:
Include 0.1% carrier protein (HSA or BSA) for long-term storage
Centrifuge at 10,000g for 10 minutes before use to remove any pre-formed aggregates
Use dynamic light scattering to verify monodispersity before experiments
Optimize buffer conditions (consider adding low concentrations of non-ionic detergents)
Inconsistent Activity Between Batches:
Challenge: Functional variability between different preparations
Solutions:
Implement standardized activity assays for each batch (e.g., integrin binding assay)
Maintain detailed records of E. coli expression conditions
Use consistent purification protocols with validated chromatographic techniques
Prepare master stocks with verified activity
Consider including positive control proteins in experimental designs
Endotoxin Contamination:
Challenge: E. coli-derived proteins may contain endotoxin that confounds immunological experiments
Solutions:
Test each preparation using LAL assay or endotoxin-specific reporter cells
Implement endotoxin removal steps (Triton X-114 phase separation or polymyxin B columns)
Include endotoxin inhibitors (polymyxin B) in experiments if complete removal isn't possible
Use endotoxin-free consumables during purification and storage
Integrin Binding Specificity Validation:
Challenge: Confirming specific integrin interactions in complex biological systems
Solutions:
Employ cell lines with defined integrin expression profiles
Use integrin-blocking antibodies as controls in all experiments
Develop solid-phase binding assays with purified integrin components
Include integrin knockout or knockdown controls
Perform competitive binding studies with established integrin ligands
Troubleshooting Workflow for Common Issues:
Problem | Diagnostic Approach | Corrective Actions |
---|---|---|
Loss of protein activity | SDS-PAGE analysis, circular dichroism | Prepare fresh stock, verify pH and buffer composition |
High experimental variability | Statistical analysis of technical replicates | Standardize protocols, increase sample size |
Unexpected cellular responses | Verify protein purity, endotoxin testing | Use alternative preparation methods, include additional controls |
Poor reproducibility between labs | Inter-laboratory validation studies | Develop detailed SOPs, share reference material |
Alternative Protein Production Strategies:
Consider mammalian expression systems for studies requiring post-translational modifications
Explore insect cell expression for higher yields with eukaryotic folding machinery
Investigate cell-free protein synthesis for rapid iteration of construct designs
These methodological solutions address the most common technical challenges associated with TGFBI 182 a.a. research, enabling more reproducible and reliable experimental outcomes .
To ensure accurate quantification and functional validation of TGFBI 182 a.a. across experimental systems, researchers should implement this comprehensive methodological framework:
Protein Quantification Methods:
Primary quantification approaches:
BCA or Bradford assay for total protein concentration
SDS-PAGE with densitometry against BSA standards
Amino acid analysis for absolute quantification
Purity assessment:
Structural integrity validation:
Circular dichroism spectroscopy to confirm secondary structure
Size-exclusion chromatography to verify monomeric state
Dynamic light scattering to assess aggregation state
Functional Activity Assays:
Binding assays:
Solid-phase binding to purified integrins or ECM components
Surface plasmon resonance for binding kinetics
Cell adhesion assays using integrin-expressing cell lines
Signaling activation:
Cell-based functional assays:
Islet cell survival assays following stress challenges
Migration/invasion assays for cancer cells
Proliferation assays using BrdU incorporation or Ki67 staining
Standardization and Reference Materials:
Develop internal reference standards with established activity
Create activity units based on specific biological responses
Implement positive controls (full-length TGFBI) in all experimental systems
Maintain detailed batch records with functional validation data
System-Specific Validation Approaches:
Experimental System | Validation Method | Expected Outcome |
---|---|---|
Islet biology | Glucose-stimulated insulin secretion | Enhanced secretion at 16.7 mM glucose |
Cancer cell studies | Dose-response proliferation/migration | System-specific response curve |
Immunological experiments | T cell proliferation assays | Measurable effect on activation/proliferation |
In vivo applications | Pharmacokinetic/biodistribution studies | Tissue-specific accumulation profile |
Troubleshooting Activity Loss:
Advanced Functional Characterization:
Structure-function studies with point mutations or truncations
Domain-specific antibody blocking experiments
Competitive inhibition with peptide fragments
Cross-species activity comparison (human vs. mouse TGFBI)
This comprehensive approach ensures both accurate quantification and reliable functional validation of TGFBI 182 a.a. across diverse experimental systems, facilitating reproducible research outcomes and meaningful inter-laboratory comparisons .
The future of TGFBI 182 a.a. research will be significantly enhanced by integrating several cutting-edge technologies and methodological approaches:
Advanced Structural Biology Techniques:
Cryo-electron microscopy: Determine high-resolution structures of TGFBI 182 a.a. in complex with integrins or ECM components
AlphaFold2/RoseTTAFold: Apply AI-based protein structure prediction to model TGFBI-protein interactions
Hydrogen-deuterium exchange mass spectrometry: Map binding interfaces with high precision
Single-molecule FRET: Investigate conformational dynamics during ligand binding
CRISPR-Based Functional Genomics:
Domain-specific knock-in mutations: Generate precise modifications in the C-terminal region
CRISPRa/CRISPRi: Modulate endogenous TGFBI expression with temporal control
Base editing: Create specific point mutations corresponding to clinical variants
CRISPR screens: Identify genes that modify TGFBI function through synthetic interactions
Advanced Imaging Technologies:
Super-resolution microscopy: Visualize TGFBI 182 a.a. interactions with cellular components at nanoscale resolution
Intravital imaging: Track TGFBI dynamics in living tissues
Correlative light and electron microscopy: Combine functional and ultrastructural information
Mass cytometry imaging: Map TGFBI distribution in relation to tissue microenvironment
Single-Cell Multi-Omics Approaches:
scRNA-seq with TGFBI 182 a.a. treatment: Identify cell-specific transcriptional responses
Spatial transcriptomics: Map TGFBI-responsive cells within intact tissues
scATAC-seq: Determine chromatin accessibility changes following TGFBI signaling
Multimodal analysis: Integrate transcriptional, epigenetic, and proteomic data at single-cell resolution
Organoid and Microphysiological Systems:
Pancreatic islet organoids: Test TGFBI 182 a.a. effects on development and function
Multi-organ-on-chip platforms: Evaluate systemic effects and metabolic interactions
3D bioprinting with TGFBI incorporation: Study spatial effects on tissue organization
Patient-derived organoids: Assess personalized responses to TGFBI treatment
Translational Research Approaches:
Technology | Application to TGFBI Research | Potential Impact |
---|---|---|
Nanobody development | Generate highly specific inhibitors of TGFBI domains | Therapeutic targeting of specific functions |
Targeted protein degradation | Develop PROTACs for TGFBI | Selective modulation of TGFBI levels |
mRNA therapeutics | Deliver modified TGFBI mRNA | Transient expression in target tissues |
AI-driven target prediction | Identify disease contexts for TGFBI intervention | Expanded therapeutic applications |
Systems Biology Integration:
Network analysis of TGFBI interactome across tissues
Mathematical modeling of TGFBI signaling dynamics
Multi-scale modeling connecting molecular events to tissue-level outcomes
Integration of clinical genomic data with experimental findings
These emerging technologies and methodological approaches will significantly advance our understanding of TGFBI 182 a.a. functions in both physiological and pathological contexts, potentially opening new avenues for therapeutic intervention in diabetes, cancer, and other TGFBI-associated conditions .
Translating basic TGFBI 182 a.a. research into clinical applications requires a systematic translational research framework that bridges fundamental discoveries with therapeutic development:
Target Validation and Development Pipeline:
Human genetic validation:
Preclinical proof-of-concept:
Test TGFBI 182 a.a. in humanized mouse models of diabetes
Develop corneal organoid models expressing dystrophy-associated mutations
Validate target engagement biomarkers for clinical translation
Therapeutic modality selection:
Recombinant protein therapy (TGFBI 182 a.a. or optimized variants)
TGFBI-mimetic peptides targeting specific integrin interactions
Gene therapy approaches for corneal dystrophies
Small molecule modulators of TGFBI downstream pathways
Diabetes-Focused Translation Strategy:
Therapeutic hypothesis refinement:
Delivery optimization:
Develop sustained-release formulations to extend half-life
Explore β-cell targeting approaches
Investigate oral delivery systems for protein/peptide therapeutics
Clinical development path:
Initial focus on high-risk populations (pre-diabetes, post-transplant)
Biomarker-driven patient selection based on TGFBI pathway activity
Adaptive trial designs with multiple endpoints (glycemic control, β-cell function)
Corneal Dystrophy Translation Approach:
Precision medicine strategy:
Therapeutic modalities:
Gene editing approaches (CRISPR) for correcting specific mutations
Antisense oligonucleotides to modulate mutant TGFBI expression
Stabilizing chaperones to prevent mutant protein aggregation
Local administration of wild-type TGFBI 182 a.a. to compete with mutant protein
Translational Research Roadmap:
Research Stage | Diabetes Applications | Corneal Dystrophy Applications |
---|---|---|
Target Validation | Islet-specific TGFBI knockout models | Mutation-specific knock-in models |
Biomarker Development | TGFBI pathway activation in accessible tissues | Imaging biomarkers for protein aggregation |
Therapeutic Prototype | Optimized TGFBI 182 a.a. variants with enhanced stability | Mutation-specific therapeutic approaches |
Delivery Development | Sustained release formulations, targeting strategies | Topical/intracorneal delivery systems |
Preclinical Validation | Humanized mouse models, non-human primates | Corneal organoids, ex vivo corneal models |
Clinical Translation | Risk stratification based on TGFBI genotype | Genotype-guided therapy selection |
Accelerating Clinical Implementation:
Engage regulatory agencies early with novel mechanism of action
Develop companion diagnostics to identify responsive patient populations
Partner with patient advocacy groups to facilitate clinical trial recruitment
Establish international research consortia to coordinate translational efforts
This comprehensive translational framework provides a systematic approach for moving TGFBI 182 a.a. discoveries from basic research into potential clinical applications, addressing the unique challenges of both diabetes and corneal dystrophy therapeutic development .
Transforming Growth Factor Beta (TGF-β) is a multifunctional cytokine that plays a crucial role in regulating various cellular processes, including cell growth, differentiation, apoptosis, and extracellular matrix production. The TGF-β family consists of over 30 related cytokines, which act in a context-dependent manner . One of the key proteins in this family is the Transforming Growth Factor Beta-Induced (TGFBI) protein, which is encoded by the TGFBI gene.
The TGFBI protein, also known as BIGH3, is a 68 kDa protein that contains an RGD (Arg-Gly-Asp) motif, which is found in many extracellular matrix proteins and is involved in cell adhesion . This protein binds to type I, II, and IV collagens and plays a role in cell-collagen interactions. It is induced by TGF-β and acts to inhibit cell adhesion . Mutations in the TGFBI gene are associated with various types of corneal dystrophy, including Thiel-Behnke and Reis-Bucklers types .
The TGF-β signaling pathway is a critical regulator of numerous cellular processes. It functions through both canonical SMAD-mediated processes and noncanonical pathways involving MAPK cascades, PI3K/AKT, Rho-like GTPases, and NF-κB signaling . This intricate signaling system is finely tuned by interactions between canonical and noncanonical pathways and plays key roles in both physiological and pathological conditions, including tissue homeostasis, fibrosis, and cancer progression .
TGF-β signaling has paradoxical actions. Under normal physiological conditions, it promotes cell quiescence and apoptosis, acting as a tumor suppressor . However, in pathological states such as inflammation and cancer, it triggers processes that facilitate cancer progression and tissue remodeling, thus promoting tumor development and fibrosis . The dual roles of TGF-β signaling in both fibrosis and cancer highlight its complex behavior across different cellular contexts .
Human recombinant TGFBI (182 amino acids) is a truncated form of the full-length TGFBI protein. Recombinant proteins are produced through recombinant DNA technology, which involves inserting the gene encoding the protein of interest into an expression system, such as bacteria or mammalian cells, to produce the protein in large quantities. This technology allows for the production of proteins that are identical to their natural counterparts, enabling researchers to study their functions and potential therapeutic applications.
Recombinant TGFBI proteins are used in various research applications to study their roles in cell adhesion, migration, and signaling. They are also used to investigate the mechanisms underlying corneal dystrophies and other diseases associated with TGFBI mutations. Additionally, TGFBI proteins are being explored as potential therapeutic targets for conditions such as fibrosis and cancer, where TGF-β signaling plays a significant role .